RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 RSC1A1Q92681 617 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CTHRC1Q96CG8 243 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 PELI1Q96FA3 418 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CMTM3Q96MX0 182 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 TNFRSF13CQ96RJ3 184 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CITED4Q96RK1 184 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 TMEM27Q9HBJ8 222 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 KLHL1Q9NR64 748 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CHRNA9Q9UGM1 479 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 MGAT4AQ9UM21 535 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 SPATA2Q9UM82 520 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CAMK2AQ9UQM7 478 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 MRPS2Q9Y399 296 aaKnown RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 U3KQ87 197 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 DOCK8Q8NF50 2099 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 A0A0B4J203 849 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 A0A1B0GVI7 797 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 A0A1W2PRG6 482 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ZNF860A6NHJ4 632 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 LRRN3E7EW58 273 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 FLRT2O43155 660 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ZNF749O43361 778 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ADAM11O75078 769 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 LDB3O75112 727 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 SLC22A5O76082 557 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 CRYZL1O95825 349 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 GYPBP06028 91 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 CT62P0C5K7 136 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 OR2T7P0C7T2 308 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 TYRP1P17643 537 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 AK4P27144 223 aaPredicted RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 MAT2AP31153 395 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 ACAA2P42765 397 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 GDI2P50395 445 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 ADPRHP54922 357 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ACTA2P62736 377 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ACTG2P63267 376 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 CDONQ4KMG0 1287 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 FIGLAQ6QHK4 219 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 SEZ6L2Q6UXD5 910 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 UNQ9370/PRO34162Q6UXP9 181 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 BTN2A1Q7KYR7 527 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 OVCH1Q7RTY7 1134 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 FGD2Q7Z6J4 655 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 SLITRK4Q8IW52 837 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 TIGD4Q8IY51 512 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 SHISA5Q8N114 240 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 LSMEM1Q8N8F7 131 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 POMGNT2Q8NAT1 580 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 CAMKVQ8NCB2 501 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ZNF680Q8NEM1 530 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 OR2T27Q8NH04 317 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 GRHL3Q8TE85 626 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 SMIM4Q8WVI0 70 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ASB12Q8WXK4 309 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 THAP4Q8WY91 577 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 ARSGQ96EG1 525 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 MYADMQ96S97 322 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 TMEM168Q9H0V1 697 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 LRRN3Q9H3W5 708 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 USP36Q9P275 1121 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 RABL2AQ9UBK7 228 aaPredicted RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 TEKT2Q9UIF3 430 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 RABL2BQ9UNT1 228 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 PCDHGA9Q9Y5G4 932 aaKnown RBP8.02□□□□□ -1.13
CLK1-201ENST00000321356 NPTNQ9Y639 398 aa8.02□□□□□ -1.13
CLK1-201ENST00000321356 LOC105369274A0A096LPK9 316 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 POM121BA6NF01 834 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 TRABD2BA6NFA1 517 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 ZNF593O00488 134 aaPredicted RBP8.01□□□□□ -1.13
CLK1-201ENST00000321356 GPR171O14626 319 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 SLC31A1O15431 190 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 GALR2O43603 387 aaPredicted RBP8.01□□□□□ -1.13
CLK1-201ENST00000321356 CBX7O95931 251 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 RAF1P04049 648 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 ANKRD34CP0C6C1 535 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 POU3F3P20264 500 aaPredicted RBP8.01□□□□□ -1.13
CLK1-201ENST00000321356 UQCRC1P31930 480 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 GABRA3P34903 492 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 KIR2DL1P43626 348 aaPredicted RBP8.01□□□□□ -1.13
CLK1-201ENST00000321356 CCR6P51684 374 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 PPP2CBP62714 309 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 PPP2CAP67775 309 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 SIRPAP78324 504 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 CAMK2DQ13557 499 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 ST3GAL2Q16842 350 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 TP53I3Q53FA7 332 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 SLC22A10Q63ZE4 541 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 RPL22L1Q6P5R6 122 aaKnown RBP8.01□□□□□ -1.13
CLK1-201ENST00000321356 NUDT18Q6ZVK8 323 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 PRSS41Q7RTY9 318 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 SYT9Q86SS6 491 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 CCDC28AQ8IWP9 274 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 TMEFF1Q8IYR6 380 aa8.01□□□□□ -1.13
CLK1-201ENST00000321356 ELMOD2Q8IZ81 293 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms