RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ADAP00813 363 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 THEGLP0DJG4 465 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CPN1P15169 458 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CPEP16870 476 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 RAB5AP20339 215 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DRD5P21918 477 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CPT2P23786 658 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 FGF9P31371 208 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 THBS4P35443 961 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SUCLG1P53597 346 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SLC26A5P58743 744 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 VLDLRP98155 873 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 INSM1Q01101 510 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 FAM189A2Q15884 450 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CRTC2Q53ET0 693 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DCAF10Q5QP82 559 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 NSUN5P2Q63ZY6 315 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SLC8B1Q6J4K2 584 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CXorf57Q6NSI4 855 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SIAH3Q8IW03 269 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 FAM71CQ8NEG0 241 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DNAAF1Q8NEP3 725 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PROKR2Q8NFJ6 384 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OR5M1Q8NGP8 315 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 C1GALT1C1Q96EU7 318 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TAAR9Q96RI9 348 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 MTERF1Q99551 399 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DOHHQ9BU89 302 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SFXN1Q9H9B4 322 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ZSCAN32Q9NX65 697 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 FBXL3Q9UKT7 428 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1B0GUH1 482 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 A6NLC8 198 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GABRR3A8MPY1 467 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CRCPO75575 148 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OPN1LWP04000 364 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TMIGD3P0DMS9 266 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 BMP7P18075 431 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ACHEP22303 614 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 RBMS1P29558 406 aaKnown RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 XCR1P46094 333 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PITPNBP48739 271 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 F2RL1P55085 397 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 AP3S2P59780 193 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GMFBP60983 142 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ITKQ08881 620 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 RBBP7Q16576 425 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PTPRNQ16849 979 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PLK5Q496M5 336 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 C14orf28Q4W4Y0 310 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 RFTN2Q52LD8 501 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TMIGD1Q6UXZ0 262 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF551Q7Z340 670 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OR2W3Q7Z3T1 314 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 LRRTM1Q86UE6 522 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 LAS2Q8IYD9 372 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GPR135Q8IZ08 494 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 OR56B2PQ8NGI1 322 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SP7Q8TDD2 431 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 EDEM1Q92611 657 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 PNPLA2Q96AD5 504 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 MALSU1Q96EH3 234 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 DDA1Q9BW61 102 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 SNHG12Q9BXW3 62 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 GSX1Q9H4S2 264 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 WDR26Q9H7D7 661 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 FGF20Q9NP95 211 aaPredicted RBP6.17□□□□□ -1.42
ZNF540-201ENST00000316433 TREM1Q9NP99 234 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 A4GALTQ9NPC4 353 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 MIEF1Q9NQG6 463 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CTPS2Q9NRF8 586 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 CYSLTR2Q9NS75 346 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 NKIRAS2Q9NYR9 191 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 COX16Q9P0S2 106 aa6.17□□□□□ -1.42
ZNF540-201ENST00000316433 C2orf92A0A1B0GVN3 265 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 NDUFS8O00217 210 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 EMC8O43402 210 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 FMO6PO60774 539 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SLC25A12O75746 678 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 NCR1O76036 304 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ACTL6AO96019 429 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 CD1AP06126 327 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 POU2F2P09086 479 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 FOSL2P15408 326 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RPA2P15927 270 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 EPB42P16452 691 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 IDSP22304 550 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ACKR3P25106 362 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 PRDX3P30048 256 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MC4RP32245 332 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MC3RP41968 323 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 NSG1P42857 185 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SLC11A2P49281 568 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MVDP53602 400 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 CDC42P60953 191 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RPS25P62851 125 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 DEFB115Q30KQ5 88 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MPPE1Q53F39 396 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SDHAF4Q5VUM1 108 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RAB12Q6IQ22 244 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms