RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SLC6A7Q99884 636 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 KATNB1Q9BVA0 655 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 DUSP21Q9H596 190 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF701Q9NV72 531 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 MOKQ9UQ07 419 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 RNF215Q9Y6U7 377 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 EFCAB7A8K855 629 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 SCGB1D2O95969 90 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 DRD5P21918 477 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 IDUAP35475 653 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 TRIM23P36406 574 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 CALHM3Q86XJ0 350 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 OR7G1Q8NGA0 311 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 HLA-CQ95604 372 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF566Q969W8 418 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 LCORQ96JN0 433 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 C7orf50Q9BRJ6 194 aaKnown RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ACOT7O00154 380 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 TSPAN9O75954 239 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 TOXO94900 526 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 TRHRP34981 398 aaPredicted RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 C1orf53Q5VUE5 145 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 BCDIN3DQ7Z5W3 292 aaKnown RBP15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ASB17Q8WXJ9 295 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 GSKIPQ9P0R6 139 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 UBQLN2Q9UHD9 624 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 DOCK5Q9H7D0 1870 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 TRBV11-1A0A0K0K1C0 115 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 AMY2BP19961 511 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ARHGAP11BQ3KRB8 267 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 MED25Q71SY5 747 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 UBQLN3Q9H347 655 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 ZNF281Q9Y2X9 895 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 NOX1Q9Y5S8 564 aa15.53■□□□□ 0.08
PHRF1-201ENST00000264555 RAD51DO75771 328 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 F13BP05160 661 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 CEACAM5P06731 702 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 AFF3P51826 1226 aaKnown RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 TRMT12Q53H54 448 aaKnown RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 FOXB2Q5VYV0 432 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 OR5T2Q8NGG2 359 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 C6orf106Q9H6K1 298 aaPredicted RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 KCNIP3Q9Y2W7 256 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 GREB1LQ9C091 1923 aaPredicted RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 METTL15A6NJ78 407 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 HCRTR1O43613 425 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 CHP2O43745 196 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 MTRF1O75570 445 aaKnown RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 VNN2O95498 520 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 PET100P0DJ07 73 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 TACR3P29371 465 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 PRKXP51817 358 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 AWAT2Q6E213 333 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 TMEM150AQ86TG1 271 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 MNTQ99583 582 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 MKRN2Q9H000 416 aaKnown RBP15.52■□□□□ 0.08
PHRF1-201ENST00000264555 BCL2L10Q9HD36 194 aa15.52■□□□□ 0.08
PHRF1-201ENST00000264555 SULT2B1O00204 365 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 GALR3O60755 368 aaPredicted RBP15.52■□□□□ 0.07
PHRF1-201ENST00000264555 PBX2P40425 430 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 HTRA4P83105 476 aaPredicted RBP15.52■□□□□ 0.07
PHRF1-201ENST00000264555 PCGF3Q3KNV8 242 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 FAM69AQ5T7M9 428 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM244Q5VVB8 128 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 CAMKMTQ7Z624 323 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 TMEM179BQ7Z7N9 219 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 OR2A1Q8NGT9 310 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 SYNPO2LQ9H987 977 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 SIAEQ9HAT2 523 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 FANCFQ9NPI8 374 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 FBXL3Q9UKT7 428 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 PTRH2Q9Y3E5 179 aaKnown RBP15.52■□□□□ 0.07
PHRF1-201ENST00000264555 MEIOCA2RUB1 952 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 CD160O95971 181 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 THBS1P07996 1170 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 FBXO45P0C2W1 286 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 MRPL49Q13405 166 aaKnown RBP15.52■□□□□ 0.07
PHRF1-201ENST00000264555 AGAP6Q5VW22 663 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 FAHD1Q6P587 224 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 CCDC54Q8NEL0 328 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 SYNPRQ8TBG9 265 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 SLC35A4Q96G79 324 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 AGAP4Q96P64 663 aa15.52■□□□□ 0.07
PHRF1-201ENST00000264555 RBMS1P29558 406 aaKnown RBP15.51■□□□□ 0.07
PHRF1-201ENST00000264555 PTH2RP49190 550 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 ATXN7L3Q14CW9 347 aaPredicted RBP15.51■□□□□ 0.07
PHRF1-201ENST00000264555 ANKRD34AQ69YU3 496 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 B3GLCTQ6Y288 498 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 DPY19L2P2Q6ZN68 376 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 OR52N1Q8NH53 320 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 MRGPRX3Q96LB0 322 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 DCDC2BA2VCK2 349 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 SOCS6O14544 535 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 RAD1O60671 282 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 AMY2AP04746 511 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 TEAD1P28347 426 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 GP2P55259 537 aaKnown RBP15.51■□□□□ 0.07
PHRF1-201ENST00000264555 HSD17B7P56937 341 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 CRMP1Q14194 572 aa15.51■□□□□ 0.07
PHRF1-201ENST00000264555 FAM219BQ5XKK7 198 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms