RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PRPH2P23942 346 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 BMP8BP34820 402 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 SNRPEP62304 92 aaKnown RBP14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 CLINT1Q14677 625 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 RBMS2Q15434 407 aaKnown RBP14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 ELOA3BQ3SY89 546 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 DCAF12L2Q5VW00 463 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 BMP8AQ7Z5Y6 402 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 ELOA3Q8NG57 546 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 OR11G2Q8NGC1 345 aa14.77□□□□□ -0.04
PRPF40B-201ENST00000261897 CDC123O75794 336 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 PCDH8O95206 1070 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 EPXP11678 715 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ST8SIA6P61647 398 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF467Q7Z7K2 595 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 GID4Q8IVV7 300 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 CHST4Q8NCG5 386 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 OR52N1Q8NH53 320 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ACOT11Q8WXI4 607 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 SHARPINQ9H0F6 387 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 MRPL17Q9NRX2 175 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 KCND3Q9UK17 655 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 FBXO4Q9UKT5 387 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 OTOFQ9HC10 1997 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ATG2BQ96BY7 2078 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 DSPPQ9NZW4 1301 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 LRRC72A6NJI9 287 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 B4GALT2O60909 372 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 PDZK1IP1Q13113 114 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 RGS7BPQ6MZT1 257 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 DPPA4Q7L190 304 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 CD163Q86VB7 1156 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 TMEM25Q86YD3 366 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF615Q8N8J6 731 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 INO80EQ8NBZ0 244 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 ULBP3Q9BZM4 244 aa14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 MAP1BP46821 2468 aaKnown RBP14.77□□□□□ -0.05
PRPF40B-201ENST00000261897 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 BET1O15155 118 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC16A5O15375 505 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 HLA-DQB1P01920 261 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 TAS2R38P59533 333 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 GUCA2BQ16661 112 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 ARMC10Q8N2F6 343 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 TEAD3Q99594 435 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 KCNK15Q9H427 330 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC6A5Q9Y345 797 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 PCDHGA5Q9Y5G8 931 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 STON1Q9Y6Q2 735 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 LINC00587B1AMM8 73 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 M0R036 132 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 CACNB4O00305 520 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF14P17017 642 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 CSNK2A2P19784 350 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 CDK2P24941 298 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 HLA-FP30511 346 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 FXYD6P3P58550 94 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 FKBP1BP68106 108 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 NHLRC3Q5JS37 347 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 RAB11FIP2Q7L804 512 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 KRT77Q7Z794 578 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 GTPBP8Q8N3Z3 284 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 ARIH2OSQ8N7S6 290 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 MAN2C1Q9NTJ4 1040 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 CAMK2AQ9UQM7 478 aa14.76□□□□□ -0.05
PRPF40B-201ENST00000261897 PRAMEF27A3QJZ7 478 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 KIAA0355O15063 1070 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 DLSTP36957 453 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 CBFBQ13951 182 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 GDF7Q7Z4P5 450 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 LRRC56Q8IYG6 542 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 BMPERQ8N8U9 685 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC16A11Q8NCK7 471 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 CDS1Q92903 461 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 CHRDQ9H2X0 955 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 SRA1Q9HD15 236 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF230Q9UIE0 474 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 BLOC1S5-TXNDC5H3BN57 136 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 AMY2AP04746 511 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 TMIGD3P0DMS9 266 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 SERTAD2Q14140 314 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 C2orf68Q2NKX9 166 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 TMEM71Q6P5X7 295 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 LINC00471Q8N535 108 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 C20orf24Q9BUV8 137 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 TINAGL1Q9GZM7 467 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 A4GALTQ9NPC4 353 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 TM7SF3Q9NS93 570 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 C20orf141Q9NUB4 165 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC22A31A6NKX4 558 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 A8MVJ9 347 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 RPN2P04844 631 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 GABRA1P14867 456 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 CERS1P27544 350 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 PDX1P52945 283 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 C9orf131Q5VYM1 1079 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 B3GNTL1Q67FW5 361 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 RHOUQ7L0Q8 258 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 GALNTL5Q7Z4T8 443 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 CBARPQ8N350 705 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms