RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TMEM38AQ9H6F2 299 aa11.97□□□□□ -0.49
CTSA-213ENST00000606782 A4GALTQ9NPC4 353 aa11.97□□□□□ -0.49
CTSA-213ENST00000606782 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
CTSA-213ENST00000606782 PAQR5Q9NXK6 330 aaPredicted RBP11.97□□□□□ -0.49
CTSA-213ENST00000606782 AP3M1Q9Y2T2 418 aa11.97□□□□□ -0.49
CTSA-213ENST00000606782 NIPBLQ6KC79 2804 aaeCLIP11.96□□□□□ -0.49
CTSA-213ENST00000606782 NPIPB9F8W1W9 429 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 CASKO14936 926 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 FCMRO60667 390 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 SMNDC1O75940 238 aaKnown RBP eCLIP11.96□□□□□ -0.49
CTSA-213ENST00000606782 AQP8O94778 261 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 FOSL1P15407 271 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 CD53P19397 219 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 KLK2P20151 261 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 UGT2B10P36537 528 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 DSTNP60981 165 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 ADAM8P78325 824 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 SYPL1Q16563 259 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 KLHL26Q53HC5 615 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 CCNJQ5T5M9 372 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 LRRC74BQ6ZQY2 392 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 RINLQ6ZS11 566 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 ARPINQ7Z6K5 226 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 ANKFN1Q8N957 763 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 OR10A6Q8NH74 314 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 SLC38A5Q8WUX1 472 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 PMM1Q92871 262 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 NPAS1Q99742 590 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 ECSITQ9BQ95 431 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.49
CTSA-213ENST00000606782 MTHFD2LQ9H903 347 aaPredicted RBP11.96□□□□□ -0.49
CTSA-213ENST00000606782 POLE3Q9NRF9 147 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 PLSCR4Q9NRQ2 329 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 MED17Q9NVC6 651 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 TAS2R1Q9NYW7 299 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 TMEM181Q9P2C4 612 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 ABCD2Q9UBJ2 740 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 VDAC3Q9Y277 283 aa11.96□□□□□ -0.49
CTSA-213ENST00000606782 DEFB108AA8MXU0 73 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 SHISA8B8ZZ34 492 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 C16orf97H3BN30 126 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 SCDO00767 359 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 SIAH2O43255 324 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 STX11O75558 287 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 LINGO3P0C6S8 592 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ARAFP10398 606 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 NID1P14543 1247 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 CRYGSP22914 178 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 HOXC12P31275 282 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 CCKARP32238 428 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 EIF1P41567 113 aaKnown RBP11.95□□□□□ -0.5
CTSA-213ENST00000606782 RBBP4Q09028 425 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 KEAP1Q14145 624 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 CD226Q15762 336 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 SGCBQ16585 318 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 KRTAP21-3Q3LHN1 58 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 GCNT6Q5T4J0 391 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 PRAMEF8Q5VWM4 474 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 PRAMEF7Q5VXH5 474 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 FBXW10Q5XX13 1052 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 TYW3Q6IPR3 259 aaKnown RBP11.95□□□□□ -0.5
CTSA-213ENST00000606782 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ESPNLQ6ZVH7 1005 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 C16orf62Q7Z3J2 963 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 GALNT10Q86SR1 603 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 PGAM4Q8N0Y7 254 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ZNF610Q8N9Z0 462 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 RBM15BQ8NDT2 890 aaKnown RBP11.95□□□□□ -0.5
CTSA-213ENST00000606782 OR10D3Q8NH80 312 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 B4GALNT2Q8NHY0 566 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
CTSA-213ENST00000606782 KLHDC3Q9BQ90 382 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 SPATA9Q9BWV2 254 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ZNF350Q9GZX5 532 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 HOXD1Q9GZZ0 328 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
CTSA-213ENST00000606782 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 ZNF226Q9NYT6 803 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 P2RX2Q9UBL9 471 aa11.95□□□□□ -0.5
CTSA-213ENST00000606782 A0A0G2JPF8 293 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 HNRNPCL2B2RXH8 293 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 HNRNPCL3B7ZW38 293 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 NME4O00746 187 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 EIF1AYO14602 144 aaKnown RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 ATP5HO75947 161 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 H6PDO95479 791 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CHRM4P08173 479 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 HNRNPCL4P0DMR1 293 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 NR2F1P10589 423 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 POU2F1P14859 743 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 HPGDP15428 266 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 ADH6P28332 368 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms