RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ESPNLQ6ZVH7 1005 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 TUSC5Q8IXB3 177 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 OR5P2Q8WZ92 322 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 HSD17B8Q92506 261 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 SRXN1Q9BYN0 137 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 ESRP2Q9H6T0 727 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 RMND5AQ9H871 391 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 PRSS51A0A1B0GVH4 220 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 A0A1W2PP18 115 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 CCDC154A6NI56 674 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF814B7Z6K7 855 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 RNASET2O00584 256 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 NDUFAB1O14561 156 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 NDUFB5O43674 189 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 CPSF4O95639 269 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 C6orf47O95873 294 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 F12P00748 615 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 ADAP00813 363 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 FRKP42685 505 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 LRRC74AQ0VAA2 488 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 MLC1Q15049 377 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF239Q16600 458 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 SPDYE7PQ495Y7 208 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 MTDHQ86UE4 582 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 LILRA2Q8N149 483 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 OR4A15Q8NGL6 344 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 BCAS4Q8TDM0 211 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 RNF128Q8TEB7 428 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 ZBTB8AQ96BR9 441 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 SH3YL1Q96HL8 342 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF385DQ9H6B1 395 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 C3orf14Q9HBI5 128 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 EQTNQ9NQ60 294 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 SAR1AQ9NR31 198 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
SHKBP1-215ENST00000597649 SHISA9B4DS77 424 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 SSX4O60224 188 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 NKX2-2O95096 273 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 KCNH1O95259 989 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 C8BP07358 591 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 LINGO3P0C6S8 592 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 FAM157CP0CG43 387 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 IL32P24001 234 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 MAPRE2Q15555 327 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 KRTAP24-1Q3LI83 254 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 TIGD2Q4W5G0 525 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 C6orf52Q5T4I8 152 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 GTF2IRD2BQ6EKJ0 949 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 BLOC1S3Q6QNY0 202 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 SZRD1Q7Z422 152 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 GTF2IRD2Q86UP8 949 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 DTX2Q86UW9 622 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 ANKRD46Q86W74 232 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 ANKS4BQ8N8V4 417 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 CCDC197Q8NCU1 140 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 OR10H5Q8NGA6 315 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 FAM110BQ8TC76 370 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 GPR151Q8TDV0 419 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 SPDL1Q96EA4 605 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 KLHL15Q96M94 604 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 NMUR2Q9GZQ4 415 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 CISD1Q9NZ45 108 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 BTNL2Q9UIR0 455 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 B3GALT5Q9Y2C3 310 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 CAPN7Q9Y6W3 813 aa14.58□□□□□ -0.08
SHKBP1-215ENST00000597649 DCTN3O75935 186 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 ANP32DO95626 131 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 NGFRP08138 427 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 SFTPDP35247 375 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 SOAT1P35610 550 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 PRKAG1P54619 331 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 PHC1P78364 1004 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 KLF10Q13118 480 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 CD226Q15762 336 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 VPS26BQ4G0F5 336 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 TMEM201Q5SNT2 666 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 MSANTD1Q6ZTZ1 278 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 CLECL1Q8IZS7 167 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 KISS1RQ969F8 398 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 VPS33AQ96AX1 596 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 ITCHQ96J02 903 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 HS6ST2Q96MM7 605 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 PANX1Q96RD7 426 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 GRIP2Q9C0E4 1043 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 NGBQ9NPG2 151 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 KLHL13Q9P2N7 655 aa14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 ING1Q9UK53 422 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-215ENST00000597649 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 RFXANKO14593 260 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ANGPT2O15123 496 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 SLC22A2O15244 555 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 KCNK2O95069 426 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ACP2P11117 423 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 EDNRAP25101 427 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 PRIM2P49643 509 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ZNF41P51814 821 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 HBA1P69905 142 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 ITGADQ13349 1161 aa14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 RNPS1Q15287 305 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-215ENST00000597649 TMEM249Q2WGJ8 235 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms