RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 THBS1P07996 1170 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 UBTFL6P0CB48 400 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 PGCP20142 388 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 TTKP33981 857 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF83P51522 516 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 RPS26P62854 115 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 HBA1P69905 142 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 RAB35Q15286 201 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 PGS1Q32NB8 556 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 C6orf136Q5SQH8 315 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 KLHL17Q6TDP4 642 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 TMEM108Q6UXF1 575 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 OLIG3Q7RTU3 272 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 C6orf120Q7Z4R8 191 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 PHC2Q8IXK0 858 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 FBXL14Q8N1E6 418 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF433Q8N7K0 673 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF563Q8TA94 476 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ST8SIA1Q92185 356 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF75CPQ92670 426 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 COQ8BQ96D53 544 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ZHX1-C8orf76Q96EF9 292 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 DNAJA3Q96EY1 480 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC35G5Q96KT7 338 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 MECRQ9BV79 373 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 BHLHE41Q9C0J9 482 aaPredicted RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 NMUR2Q9GZQ4 415 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 CBLN4Q9NTU7 201 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 EMC3Q9P0I2 261 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 MKLN1Q9UL63 735 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 NOSIPQ9Y314 301 aaKnown RBP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 CUBNO60494 3623 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 ATRQ13535 2644 aa9.32□□□□□ -0.92
CHMP2A-202ENST00000596708 E7EQL1 145 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 M0R1B8 84 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ETV2O00321 342 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 FCMRO60667 390 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 AK1P00568 194 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 DHRS4L1P0CG22 281 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 COX5AP20674 150 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 PRPS1L1P21108 318 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 PTAFRP25105 342 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 FABP6P51161 128 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 CASP9P55211 416 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 DSCR9P59020 149 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 IRX1P78414 480 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 SKP2Q13309 424 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ZNF141Q15928 474 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ARHGAP11BQ3KRB8 267 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 SYT14P1Q58G82 188 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 XKR7Q5GH72 579 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 FBXW9Q5XUX1 488 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ZCCHC23Q6ZST2 131 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 EIF3MQ7L2H7 374 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 C16orf62Q7Z3J2 963 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 MTDHQ86UE4 582 aaKnown RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 CLEC4FQ8N1N0 589 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 MUC15Q8N387 334 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 SLC25A43Q8WUT9 341 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 HTRA1Q92743 480 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 APH1AQ96BI3 265 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 TUBGCP3Q96CW5 907 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 APOPT1Q96IL0 206 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 C3orf30Q96M34 536 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 TNFRSF13CQ96RJ3 184 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 KCNK17Q96T54 332 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 DHRS9Q9BPW9 319 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 C1QTNF6Q9BXI9 259 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 CTPS2Q9NRF8 586 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 EXD2Q9NVH0 621 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 ASB6Q9NWX5 421 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 KCNE5Q9UJ90 142 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 PCDHGB4Q9UN71 923 aa9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 SPIN1Q9Y657 262 aaPredicted RBP9.31□□□□□ -0.92
CHMP2A-202ENST00000596708 RNF103-CHMP3A0A140T963 221 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 GPR171O14626 319 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 SPAG7O75391 227 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 MRPL33O75394 65 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 UGT2B17O75795 530 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 CPSF4O95639 269 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 OR12D1P0DN82 309 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 G6PDP11413 515 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 CCNA2P20248 432 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 CD40P25942 277 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 RYKP34925 604 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 APOBEC1P41238 236 aaKnown RBP9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 SPOCK1Q08629 439 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 MAD2L1Q13257 205 aaPredicted RBP9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 PDK3Q15120 406 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 TMEM249Q2WGJ8 235 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 C6orf52Q5T4I8 152 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 OR4F3Q6IEY1 312 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 CLECL1Q8IZS7 167 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 OR10H5Q8NGA6 315 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 XAGE5Q8WWM1 108 aa9.3□□□□□ -0.92
CHMP2A-202ENST00000596708 NANOS1Q8WY41 292 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms