RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
MBD3-206ENST00000589901 SONP18583 2426 aaKnown RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 ZNF724A8MTY0 619 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 TYROBPO43914 113 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 CRLF1O75462 422 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 AK1P00568 194 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 CD8AP01732 235 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 IGHV4-39P01824 125 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 IDUAP35475 653 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 ETFDHQ16134 617 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 PDCD2Q16342 344 aaPredicted RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 SYT14P1Q58G82 188 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 HEPHL1Q6MZM0 1159 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 TMPPEQ6ZT21 453 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 EIF3MQ7L2H7 374 aaKnown RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 C16orf62Q7Z3J2 963 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 GALNT5Q7Z7M9 940 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 HMGN2P46Q86SG4 172 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 LSRQ86X29 649 aaPredicted RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 ZNF100Q8IYN0 542 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 OR4A15Q8NGL6 344 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 ARL8AQ96BM9 186 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 DNAJA3Q96EY1 480 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 PKNOX2Q96KN3 472 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 ACER3Q9NUN7 267 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 ASIC5Q9NY37 505 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 CISD1Q9NZ45 108 aaKnown RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 NPAP1Q9NZP6 1156 aa14.39□□□□□ -0.11
MBD3-206ENST00000589901 GDF2Q9UK05 429 aaPredicted RBP14.39□□□□□ -0.11
MBD3-206ENST00000589901 WDR91A4D1P6 747 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 SHISA9B4DS77 424 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 SULT2B1O00204 365 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 RNASET2O00584 256 aaKnown RBP14.38□□□□□ -0.11
MBD3-206ENST00000589901 BIRC5O15392 142 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 IGHV3-9P01782 118 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 THBS1P07996 1170 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 OR12D1P0DN82 309 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 GGT1P19440 569 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 PGCP20142 388 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 COX5AP20674 150 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 PTNP21246 168 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 PGM1P36871 562 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 PHC1P78364 1004 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 DMTNQ08495 405 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 ABLIM2Q6H8Q1 611 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 TYW3Q6IPR3 259 aaKnown RBP14.38□□□□□ -0.11
MBD3-206ENST00000589901 ANKRD46Q86W74 232 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 ZNF781Q8N8C0 355 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 FAM71CQ8NEG0 241 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 OR8J2Q8NGG1 315 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 XAGE5Q8WWM1 108 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 TMEM234Q8WY98 164 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 RAB8BQ92930 207 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 ZG16BQ96DA0 208 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 MUCL1Q96DR8 90 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 ZIM3Q96PE6 472 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 PAIP2Q9BPZ3 127 aaKnown RBP14.38□□□□□ -0.11
MBD3-206ENST00000589901 TRAF4Q9BUZ4 470 aaPredicted RBP14.38□□□□□ -0.11
MBD3-206ENST00000589901 AKTIPQ9H8T0 292 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 CTPS2Q9NRF8 586 aa14.38□□□□□ -0.11
MBD3-206ENST00000589901 MXRA5Q9NR99 2828 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 NUP214P35658 2090 aaPredicted RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 ZNF716A6NP11 495 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 ABCD4O14678 606 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 KIAA0513O60268 411 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 SCN2BO60939 215 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 ADAM11O75078 769 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 PGM3O95394 542 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 CPSF4O95639 269 aaKnown RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 SERPINE1P05121 402 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 TFPIP10646 304 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 RYKP34925 604 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 CDH11P55287 796 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 CSNK2A1P68400 391 aaPredicted RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 FUT5Q11128 374 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 SMU1Q2TAY7 513 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 TIMM23BQ5SRD1 257 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 TNFAIP8L2Q6P589 184 aaPredicted RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 ZNF433Q8N7K0 673 aaPredicted RBP14.37□□□□□ -0.11
MBD3-206ENST00000589901 ARL5BQ96KC2 179 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 CCDC106Q9BWC9 280 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 DPY30Q9C005 99 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 EXD2Q9NVH0 621 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 PCDHGB4Q9UN71 923 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
MBD3-206ENST00000589901 CADP27708 2225 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 IGKV3D-15A0A087WSY6 115 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 OR5H1A6NKK0 313 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 CLDN24A6NM45 220 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 RAD51DO75771 328 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 C1QCP02747 245 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 UQCRC2P22695 453 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 NTF4P34130 210 aa14.36□□□□□ -0.11
MBD3-206ENST00000589901 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
MBD3-206ENST00000589901 PLAURQ03405 335 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms