RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TMEM27Q9HBJ8 222 aa11.96□□□□□ -0.49
HDAC1-208ENST00000482310 ACER3Q9NUN7 267 aa11.96□□□□□ -0.49
HDAC1-208ENST00000482310 ALKBH4Q9NXW9 302 aa11.96□□□□□ -0.49
HDAC1-208ENST00000482310 RHCGQ9UBD6 479 aa11.96□□□□□ -0.49
HDAC1-208ENST00000482310 ZNF337Q9Y3M9 751 aa11.96□□□□□ -0.49
HDAC1-208ENST00000482310 MAST4O15021 2626 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 PHF3Q92576 2039 aaKnown RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TMED7-TICAM2A0A0A6YYA0 188 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TMEM72A0PK05 275 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 B8ZZF3 427 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 H0YC42 278 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TFPIP10646 304 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 NQO1P15559 274 aaKnown RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ABOP16442 354 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 SHC1P29353 583 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 SLC1A3P43003 542 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TPD52P55327 224 aaPredicted RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 MRPL49Q13405 166 aaKnown RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 MTX3Q5HYI7 312 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ALG10BQ5I7T1 473 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 AAGABQ6PD74 315 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ZNF771Q7L3S4 317 aaPredicted RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 P3H2Q8IVL5 708 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ADAMTS16Q8TE57 1224 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ST8SIA1Q92185 356 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 MRGPRX4Q96LA9 322 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TRIM2Q9C040 744 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ACKR4Q9NPB9 350 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 SELENONQ9NZV5 590 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ACAD8Q9UKU7 415 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 MED12LQ86YW9 2145 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 DOCK7Q96N67 2140 aa11.95□□□□□ -0.5
HDAC1-208ENST00000482310 ELOA3DA6NLF2 546 aaPredicted RBP11.94□□□□□ -0.5
HDAC1-208ENST00000482310 AQP7O14520 342 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 EFNA2O43921 213 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 SUSD5O60279 629 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 HCN1O60741 890 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 IGHG3P01860 377 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 TPOP07202 933 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 EDN3P14138 238 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 ZNF17P17021 662 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 CXCR1P25024 350 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 PTGS2P35354 604 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
HDAC1-208ENST00000482310 POLR2HP52434 150 aaKnown RBP11.94□□□□□ -0.5
HDAC1-208ENST00000482310 GFRA1P56159 465 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 VLDLRP98155 873 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 KCNC4Q03721 635 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 PIN1Q13526 163 aaPredicted RBP11.94□□□□□ -0.5
HDAC1-208ENST00000482310 ESPL1Q14674 2120 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 KPNB1Q14974 876 aaKnown RBP11.94□□□□□ -0.5
HDAC1-208ENST00000482310 ELOA3BQ3SY89 546 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 KRTCAP3Q53RY4 240 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 FGD2Q7Z6J4 655 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 CD163Q86VB7 1156 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 ELOA3Q8NG57 546 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 C3orf49Q96BT1 292 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 SLC41A3Q96GZ6 507 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 OR11A1Q9GZK7 315 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 SLC7A7Q9UM01 511 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 NBASA2RRP1 2371 aa11.94□□□□□ -0.5
HDAC1-208ENST00000482310 A0A0B4J2E0 115 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 A0A1B0GX12 115 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 A0A1W2PNR3 127 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 DHRS12A0PJE2 317 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 H0Y3Z8 333 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 FAAHO00519 579 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 KPNA4O00629 521 aaPredicted RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 EIF1AYO14602 144 aaKnown RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 TNFSF11O14788 317 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 SEMA7AO75326 666 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 FABP3P05413 133 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 FUT4P22083 530 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 UQCRFS1P47985 274 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 LHX2P50458 406 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 SUCLG1P53597 346 aaKnown RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CDH12P55289 794 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CLDN20P56880 219 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CHRNB3Q05901 458 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CRYZQ08257 329 aaKnown RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CCNIQ14094 377 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 TMEM44Q2T9K0 475 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 TMEM176BQ3YBM2 270 aaPredicted RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 GLYR1Q49A26 553 aaPredicted RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 FAM98BQ52LJ0 330 aaKnown RBP11.93□□□□□ -0.5
HDAC1-208ENST00000482310 C3orf33Q6P1S2 294 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 ZNF585AQ6P3V2 769 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 GDF7Q7Z4P5 450 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
HDAC1-208ENST00000482310 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms