RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 MRPS30Q9NP92 439 aaKnown RBP8.21□□□□□ -1.09
RTN4-206ENST00000394611 SEMA4GQ9NTN9 838 aa8.21□□□□□ -1.09
RTN4-206ENST00000394611 BABAM2Q9NXR7 383 aa8.21□□□□□ -1.09
RTN4-206ENST00000394611 NDOR1Q9UHB4 597 aa8.21□□□□□ -1.09
RTN4-206ENST00000394611 TRBV23-1A0A0A0MS06 115 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 GRXCR2A6NFK2 248 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 ZNF593O00488 134 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 PEX14O75381 377 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 SERPINA3P01011 423 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 PRH1P02810 166 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 DCNP07585 359 aaKnown RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 LINC00271P0C7V0 271 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 JMJD7P0C870 316 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 OR8G3PP0DMU2 310 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 ZNF3P17036 446 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 PNLIPRP1P54315 467 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 NTHL1P78549 312 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 GSG1LQ6UXU4 331 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 DPPA4Q7L190 304 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 KRT77Q7Z794 578 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 ZNF546Q86UE3 836 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 AMZ2Q86W34 360 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 LRRC28Q86X40 367 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 STPG2Q8N412 459 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 INO80EQ8NBZ0 244 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 OR52E4Q8NGH9 312 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 SLC41A3Q96GZ6 507 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 C1GALT1Q9NS00 363 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 GPATCH2Q9NW75 528 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 A0A0B4J2A0 478 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 LINC01553A4QN01 128 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 TMEM200CA6NKL6 621 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 KLK8O60259 260 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 RBBP9O75884 186 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 RRASP10301 218 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 TYRP14679 529 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 IL1RNP18510 177 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 CSNK2A2P19784 350 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 LSSP48449 732 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 GK2Q14410 553 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 OCLNQ16625 522 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 ZXDCQ2QGD7 858 aaPredicted RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 GRHL2Q6ISB3 625 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 KIAA1324Q6UXG2 1013 aaKnown RBP8.21□□□□□ -1.1
RTN4-206ENST00000394611 ZNF511Q8NB15 262 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 CXorf40AQ8TE69 158 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 CDS1Q92903 461 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 STARD5Q9NSY2 213 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 SHPKQ9UHJ6 478 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 PCDHGB7Q9Y5F8 929 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 NUBP2Q9Y5Y2 271 aa8.21□□□□□ -1.1
RTN4-206ENST00000394611 TRIOBPQ9H2D6 2365 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GPR31O00270 319 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 SFTPBP07988 381 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 C1SP09871 688 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 LIMS3P0CW19 117 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 LIMS4P0CW20 117 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 HOXB6P17509 224 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 GSTM3P21266 225 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 TBXA2RP21731 343 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 DDX6P26196 483 aaKnown RBP eCLIP8.2□□□□□ -1.14e-30■□□□□ 10.7
RTN4-206ENST00000394611 HLA-FP30511 346 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 AP3S2P59780 193 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 RAB40BQ12829 278 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 PAN3Q58A45 887 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 PLPP4Q5VZY2 271 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 TCTE3Q8IZS6 198 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CNOT9Q92600 299 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 OSTF1Q92882 214 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ZNF558Q96NG5 402 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CMKLR1Q99788 373 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 VN1R3Q9BXE9 311 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 NKX2-4Q9H2Z4 354 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 PDFQ9HBH1 243 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 TMEM27Q9HBJ8 222 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CHMP1AQ9HD42 196 aaPredicted RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 FTSJ1Q9UET6 329 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 SCP2D1Q9UJQ7 156 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 DIMT1Q9UNQ2 313 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 A0A1B0GTH9 108 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 M0QZQ0 153 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 IFNGP01579 166 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 CCKBRP32239 447 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 FAUP35544 74 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 MAPK8P45983 427 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ILF3Q12906 894 aaKnown RBP eCLIP8.2□□□□□ -1.1
RTN4-206ENST00000394611 DYRK1AQ13627 763 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 HNF4GQ14541 408 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 EXOSC7Q15024 291 aaKnown RBP8.2□□□□□ -1.1
RTN4-206ENST00000394611 FAM74A3Q4VXF1 159 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 OR10K2Q6IF99 312 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 BTN2A1Q7KYR7 527 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 POMGNT2Q8NAT1 580 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 OR5M3Q8NGP4 307 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 ABHD4Q8TB40 342 aa8.2□□□□□ -1.1
RTN4-206ENST00000394611 MARC2Q969Z3 335 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms