RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CHRNA9Q9UGM1 479 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 EMC9Q9Y3B6 208 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 A0A0J9YW62 118 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 A0A1W2PNV4 684 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 CLDN24A6NM45 220 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 EEF1E1-BLOC1S5C9J1V9 151 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 EEF1E1O43324 174 aaKnown RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 PLGP00747 810 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 NUDT7P0C024 238 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 SLC1A3P43003 542 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 PCYT1AP49585 367 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 CSNK2A1P68400 391 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 SORDQ00796 357 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 EPS8Q12929 822 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 SCARB2Q14108 478 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 RNPS1Q15287 305 aaKnown RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 TMEM176BQ3YBM2 270 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 MEX3BQ6ZN04 569 aaKnown RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF836Q6ZNA1 936 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 GDF7Q7Z4P5 450 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 DMRTC2Q8IXT2 367 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 GCNT2Q8N0V5 402 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 SLC43A2Q8N370 569 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 OR8J3Q8NGG0 315 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 NFKBIDQ8NI38 313 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 FIG4Q92562 907 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 OSTF1Q92882 214 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF845Q96IR2 970 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 NPAS1Q99742 590 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 TACO1Q9BSH4 297 aaKnown RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 CCDC106Q9BWC9 280 aa16.61■□□□□ 0.25
CHTOP-202ENST00000368687 NPDC1Q9NQX5 325 aaPredicted RBP16.61■□□□□ 0.25
CHTOP-202ENST00000368687 C19orf84I3L1E1 186 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 MSTNO14793 375 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 DNPH1O43598 174 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 CXCL13O43927 109 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 TNFSF13O75888 250 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 SSTR2P30874 369 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 LSP1P33241 339 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 CPA2P48052 419 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 IDH2P48735 452 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 POLR2HP52434 150 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 RAC3P60763 192 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF239Q16600 458 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 SYT14P1Q58G82 188 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 RPS26P11Q5JNZ5 115 aaPredicted RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 INTS11Q5TA45 600 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 PPP4R4Q6NUP7 873 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 CPLX4Q7Z7G2 160 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 HMGN2P46Q86SG4 172 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 VRK2Q86Y07 508 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 MCEMP1Q8IX19 187 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 KAT8Q9H7Z6 458 aaKnown RBP16.6■□□□□ 0.25
CHTOP-202ENST00000368687 FANCFQ9NPI8 374 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 KCNN3Q9UGI6 736 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 AP3M1Q9Y2T2 418 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 HDGFL3Q9Y3E1 203 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 LRBAP50851 2863 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 CACNA1DQ01668 2161 aa16.6■□□□□ 0.25
CHTOP-202ENST00000368687 FBN2P35556 2912 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 GMNCA6NCL1 334 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 FBP2O00757 339 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 MRASO14807 208 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF208O43345 1280 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 EFNA2O43921 213 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 BCAS1O75363 584 aaPredicted RBP16.59■□□□□ 0.25
CHTOP-202ENST00000368687 IL11P20809 199 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 CTBP2P56545 445 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 PLAURQ03405 335 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 FOXF2Q12947 444 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 REP15Q6BDI9 236 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 WBP2NLQ6ICG8 309 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 DHRS4L2Q6PKH6 230 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 FAM214BQ7L5A3 538 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 NET1Q7Z628 596 aaPredicted RBP16.59■□□□□ 0.25
CHTOP-202ENST00000368687 ARPINQ7Z6K5 226 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 SNX32Q86XE0 403 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 CNEP1R1Q8N9A8 125 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 RNF128Q8TEB7 428 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 LRRC58Q96CX6 371 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 DDIT4LQ96D03 193 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 ZHX1-C8orf76Q96EF9 292 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 C14orf79Q96F83 325 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 KLHL28Q9NXS3 571 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 SLC13A4Q9UKG4 626 aa16.59■□□□□ 0.25
CHTOP-202ENST00000368687 SS18L1O75177 396 aaPredicted RBP16.58■□□□□ 0.24
CHTOP-202ENST00000368687 AQP8O94778 261 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 CD8BP10966 210 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 PRF1P14222 555 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 CD1EP15812 388 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 UQCRC1P31930 480 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 MTPNP58546 118 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 GUSBP1Q15486 140 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 ADRM1Q16186 407 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 ATP6V1C2Q8NEY4 427 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 OR6K3Q8NGY3 331 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 OR5B2Q96R09 309 aa16.58■□□□□ 0.24
CHTOP-202ENST00000368687 ELAC2Q9BQ52 826 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms