RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PRRC2CQ9Y520 2896 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 PCNX3Q9H6A9 2034 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 LOC400499M0QZD8 3231 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 A0A0B4J2E0 115 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TRBV11-1A0A0K0K1C0 115 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 A0A1B0GX12 115 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 LNP1A1A4G5 178 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ELOA3DA6NLF2 546 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 G3V3Y1 287 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 AIREO43918 545 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 LYPD3O95274 346 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 NADKO95544 446 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 LDOC1O95751 146 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 CER1O95813 267 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 IGKV3-11P04433 115 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 F13BP05160 661 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 UBL4AP11441 157 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CDK4P11802 303 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 FPR3P25089 353 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ABCD3P28288 659 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 AVPR2P30518 371 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 HOXA6P31267 233 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TTKP33981 857 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TGM4P49221 684 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MXD1Q05195 221 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PGGHGQ32M88 737 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ELOA3BQ3SY89 546 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SYT6Q5T7P8 510 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 NIPAL1Q6NVV3 410 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 LYPD4Q6UWN0 246 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 SLCO6A1Q86UG4 719 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 KDM8Q8N371 416 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 POGLUT1Q8NBL1 392 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SDR9C7Q8NEX9 313 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ELOA3Q8NG57 546 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR2T33Q8NG76 320 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR52L1Q8NGH7 329 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR52I1Q8NGK6 324 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 OR1N1Q8NGS0 311 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ADAMTS18Q8TE60 1221 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 RAB2BQ8WUD1 216 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 NAT6Q93015 286 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ADIPOR1Q96A54 375 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 HSPBAP1Q96EW2 488 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MVB12AQ96EY5 273 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TMEM80Q96HE8 168 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 Q96MT0 163 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 FOXN4Q96NZ1 517 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ERMAPQ96PL5 475 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 TUBA1CQ9BQE3 449 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PSD2Q9BQI7 771 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 POLDIP3Q9BY77 421 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 WWTR1Q9GZV5 400 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CCDC86Q9H6F5 360 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 MKKSQ9NPJ1 570 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 IL20Q9NYY1 176 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SEC14L4Q9UDX3 406 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TESQ9UGI8 421 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 ENPP5Q9UJA9 477 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZNF223Q9UK11 482 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 VDAC3Q9Y277 283 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ERGIC3Q9Y282 383 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 RPL36Q9Y3U8 105 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 MMACHCQ9Y4U1 282 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 IER3IP1Q9Y5U9 82 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MPDZO75970 2070 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 EFCAB10A6NFE3 127 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 D6RAR5 112 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 C11orf98E9PRG8 122 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 NPIPB9F8W1W9 429 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 H7C1C5 153 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PSMD9O00233 223 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MYL12BO14950 172 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SURF4O15260 269 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZNF264O43296 627 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CHP2O43745 196 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 MPZL2O60487 215 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CSO75390 466 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 SLITRK5O94991 958 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 F10P00742 488 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 PLGP00747 810 aaPredicted RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 SYPP08247 313 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 HBQ1P09105 142 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TACR3P29371 465 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 GRPRP30550 384 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TGFBR2P37173 567 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 STAT5AP42229 794 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 RPS5P46782 204 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 MTNR1AP48039 350 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 TMBIM6P55061 237 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 SNRPGP62308 76 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 LCN6P62502 163 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ERVK-25P63136 954 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 RNF4P78317 190 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 FOXK2Q01167 660 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 ROR2Q01974 943 aaKnown RBP3.15□□□□□ -1.91
LIG4-205ENST00000614526 ZNF117Q03924 483 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 CRMP1Q14194 572 aa3.15□□□□□ -1.91
LIG4-205ENST00000614526 INSL4Q14641 139 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms