RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FAM174BQ3ZCQ3 159 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF672Q499Z4 452 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF385BQ569K4 471 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ANXA8L1Q5VT79 327 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 FIGNL1Q6PIW4 674 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 SEZ6L2Q6UXD5 910 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 NUFIP2Q7Z417 695 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF619Q8N2I2 560 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 STEAP2Q8NFT2 490 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 OR4C3Q8NH37 302 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ROBO4Q8WZ75 1007 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 PIK3R3Q92569 461 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 FBXW5Q969U6 566 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 GTPBP3Q969Y2 492 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 CIDECQ96AQ7 238 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 TESCQ96BS2 214 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ELP4Q96EB1 424 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 BHLHE41Q9C0J9 482 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 TMEM185BQ9H7F4 350 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 Q9N2J8 555 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 FBXO34Q9NWN3 711 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 PCDHGB4Q9UN71 923 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 A0A096LNT2 108 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 FAM234BA2RU67 622 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 DPRXA6NFQ7 191 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 CFLARO15519 480 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 PHF1O43189 567 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 CCDC22O60826 627 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 SYNGR4O95473 234 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 FAM107AO95990 144 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 IL6P05231 212 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 CD3EP07766 207 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF17P17021 662 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 SHC1P29353 583 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 MRPL19P49406 292 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 POLR2JP52435 117 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 RAC1P63000 192 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 TAB1Q15750 504 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 PLPPR5Q32ZL2 321 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 AGKQ53H12 422 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 SPANXN4Q5MJ08 99 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 GKAP1Q5VSY0 366 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 OR4F3Q6IEY1 312 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 DNAJC14Q6Y2X3 702 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 STK32CQ86UX6 486 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 OSTF1Q92882 214 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 TEX37Q96LM6 180 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 RNF145Q96MT1 663 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 AMDHD1Q96NU7 426 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 TACO1Q9BSH4 297 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 FANCFQ9NPI8 374 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 ACSS1Q9NUB1 689 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 DDX18Q9NVP1 670 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 PAQR5Q9NXK6 330 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 CCDC167Q9P0B6 97 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 STOML1Q9UBI4 398 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 ARL2BPQ9Y2Y0 163 aa14.62□□□□□ -0.07
SHKBP1-215ENST00000597649 A8MV72 311 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 ALG1L2C9J202 215 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 C9JVG2 144 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 EFNA2O43921 213 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 EFNA1P20827 205 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 ADH6P28332 368 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 IL12AP29459 219 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 MAP3K8P41279 467 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 HSPB3Q12988 150 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 CHRFAM7AQ494W8 412 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 SFRP5Q5T4F7 317 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 HBMQ6B0K9 141 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 TFAP2EQ6VUC0 442 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNF551Q7Z340 670 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 PIGWQ7Z7B1 504 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 ZAR1Q86SH2 424 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 GATSQ8NAP1 163 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 KBTBD8Q8NFY9 601 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 OR8J2Q8NGG1 315 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 OR9I1Q8NGQ6 314 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 ABHD3Q8WU67 409 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 HOXB13Q92826 284 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 OR52E6Q96RD3 313 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 TRAF4Q9BUZ4 470 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 HDHD5Q9BXW7 423 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 TRIM2Q9C040 744 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 MED17Q9NVC6 651 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 TMEM45AQ9NWC5 275 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 MRTO4Q9UKD2 239 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 PLCE1Q9P212 2302 aa14.61□□□□□ -0.07
SHKBP1-215ENST00000597649 IGHV4-30-2A0A087WSY4 118 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 A0A087WZY1 265 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 C7orf72A4D263 438 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 NR5A2O00482 541 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 RAMP1O60894 148 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 SLITRK5O94991 958 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 OXSR1O95747 527 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 PGRP06401 933 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 PTNP21246 168 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 PSMD4P55036 377 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 CARD18P57730 90 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 BSPH1Q075Z2 132 aa14.6□□□□□ -0.07
SHKBP1-215ENST00000597649 ZNHIT3Q15649 155 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms