RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MAP3K8P41279 467 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 FOXG1P55316 489 aaPredicted RBP10.67□□□□□ -0.7
PRPF8-208ENST00000573716 C2orf54Q08AI8 447 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 GABRA6Q16445 453 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 MST1LQ2TV78 715 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 ZNF678Q5SXM1 525 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 CDC73Q6P1J9 531 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 ZNF527Q8NB42 609 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 ZNF540Q8NDQ6 660 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 ZFP28Q8NHY6 868 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 CDS1Q92903 461 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 ARL8AQ96BM9 186 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 MRGPRX4Q96LA9 322 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 TMEM237Q96Q45 408 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 SNX18Q96RF0 628 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 BTBD2Q9BX70 525 aa10.67□□□□□ -0.7
PRPF8-208ENST00000573716 QRSL1Q9H0R6 528 aaKnown RBP10.67□□□□□ -0.7
PRPF8-208ENST00000573716 METTL17Q9H7H0 456 aaPredicted RBP10.67□□□□□ -0.7
PRPF8-208ENST00000573716 MYOZ1Q9NP98 299 aaPredicted RBP10.67□□□□□ -0.7
PRPF8-208ENST00000573716 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 TRIM49D1C9J1S8 452 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 SULT2B1O00204 365 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 CYP7B1O75881 506 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
PRPF8-208ENST00000573716 TFPIP10646 304 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 LCN1P31025 176 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 MAGEA12P43365 314 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 DIO1P49895 249 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 CHN2P52757 468 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 SUMO3P55854 103 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-208ENST00000573716 QPRTQ15274 297 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 SWI5Q1ZZU3 235 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 OR7E24Q6IFN5 339 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 NOXRED1Q6NXP6 359 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 C3orf33Q6P1S2 294 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 ZDHHC24Q6UX98 284 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 MTERF4Q7Z6M4 381 aaKnown RBP10.66□□□□□ -0.7
PRPF8-208ENST00000573716 LINC01356Q8N9X3 169 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 OR52E4Q8NGH9 312 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 HOXB13Q92826 284 aaPredicted RBP10.66□□□□□ -0.7
PRPF8-208ENST00000573716 GIMAP5Q96F15 307 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 EGLN2Q96KS0 407 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 KCNS3Q9BQ31 491 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 IQCGQ9H095 443 aaKnown RBP10.66□□□□□ -0.7
PRPF8-208ENST00000573716 SIRT5Q9NXA8 310 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 ICAM5Q9UMF0 924 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 ACTL7BQ9Y614 415 aa10.66□□□□□ -0.7
PRPF8-208ENST00000573716 POC1B-GALNT4F8VUJ3 575 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 MRPL33O75394 65 aaKnown RBP10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CRCPO75575 148 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 SNUPNO95149 360 aaKnown RBP10.65□□□□□ -0.7
PRPF8-208ENST00000573716 ITGA5P08648 1049 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 IFI6P09912 130 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CDH2P19022 906 aaPredicted RBP10.65□□□□□ -0.7
PRPF8-208ENST00000573716 PKNOX1P55347 436 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CSNK2A1P68400 391 aaPredicted RBP10.65□□□□□ -0.7
PRPF8-208ENST00000573716 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 MERTKQ12866 999 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 LCP2Q13094 533 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CCNIQ14094 377 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 TIGD2Q4W5G0 525 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
PRPF8-208ENST00000573716 VHLLQ6RSH7 139 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 KLHL24Q6TFL4 600 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CASP12Q6UXS9 341 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 IKBIPQ70UQ0 350 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 CCNYL1Q8N7R7 359 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 WDR31Q8NA23 367 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 ZNF524Q96C55 264 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 PPCDCQ96CD2 204 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 ZHX1-C8orf76Q96EF9 292 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 MUS81Q96NY9 551 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 ACSS3Q9H6R3 686 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 MID1IP1Q9NPA3 183 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 SH3BP4Q9P0V3 963 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 UPB1Q9UBR1 384 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 STK38LQ9Y2H1 464 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 AMDHD2Q9Y303 409 aa10.65□□□□□ -0.7
PRPF8-208ENST00000573716 KLF11O14901 512 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SEC22BO75396 215 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SKAP2O75563 359 aaPredicted RBP10.64□□□□□ -0.71
PRPF8-208ENST00000573716 STAMBPO95630 424 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 HSPA4LO95757 839 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 IMPDH1P20839 514 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SERPINF1P36955 418 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SERPINB9P50453 376 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 FOXA1P55317 472 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 CBFBQ13951 182 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 LASP1Q14847 261 aaKnown RBP10.64□□□□□ -0.71
PRPF8-208ENST00000573716 KLHL26Q53HC5 615 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 ZNF385BQ569K4 471 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRPF8-208ENST00000573716 ABLIM2Q6H8Q1 611 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SHQ1Q6PI26 577 aaKnown RBP10.64□□□□□ -0.71
PRPF8-208ENST00000573716 THSD4Q6ZMP0 1018 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 MTDHQ86UE4 582 aaKnown RBP10.64□□□□□ -0.71
PRPF8-208ENST00000573716 TMEM151AQ8N4L1 468 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SPATA4Q8NEY3 305 aa10.64□□□□□ -0.71
PRPF8-208ENST00000573716 SEMA6DQ8NFY4 1073 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms