RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CRB3Q9BUF7 120 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NUDT9Q9BW91 350 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ITPAQ9BY32 194 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MRPS26Q9BYN8 205 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ULBP3Q9BZM4 244 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 UCK2Q9BZX2 261 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SEMA4CQ9C0C4 833 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 WWTR1Q9GZV5 400 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF700Q9H0M5 742 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 QRSL1Q9H0R6 528 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NXF5Q9H1B4 397 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RIBC2Q9H4K1 309 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 POLR1BQ9H9Y6 1135 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 APMAPQ9HDC9 416 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 VCX3AQ9NNX9 186 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 EXOSC3Q9NQT5 275 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 FBXO34Q9NWN3 711 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SCN3BQ9NY72 215 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRR13Q9NZ81 148 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 SELENONQ9NZV5 590 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RHCGQ9UBD6 479 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPS6KB2Q9UBS0 482 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TCFL5Q9UL49 500 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PADI1Q9ULC6 663 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 NDRG4Q9ULP0 352 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM5Q9Y2B1 443 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 LOXL2Q9Y4K0 774 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCDHGA3Q9Y5H0 932 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 MUC3AQ02505 3323 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 DNAH14Q0VDD8 3507 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 HEATR5AQ86XA9 2040 aa3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRRC2CQ9Y520 2896 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNOT1A5YKK6 2376 aaKnown RBP3.65□□□□□ -1.83
HMGB1P37-201ENST00000439613 COL27A1Q8IZC6 1860 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 EXPH5Q8NEV8 1989 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LOC102723996A0A087X1L8 192 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A1W2PQ72 361 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A1W2PQD3 144 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SH3D21A4FU49 640 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRIM64A6NGJ6 449 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR6C70A6NIJ9 312 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CPSF4LA6NMK7 179 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 E9PQ18 207 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLD2O14939 933 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF264O43296 627 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TSPAN2O60636 221 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TPST2O60704 377 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 MRPS14O60783 128 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SEMA7AO75326 666 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 STK17BO94768 372 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SEC24DO94855 1032 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 UTS2O95399 124 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 EPPINO95925 133 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 MT-CO3P00414 261 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CSTAP01040 98 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 GASTP01350 101 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGKV1D-16P01601 117 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAB40ALP0C0E4 278 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LINGO3P0C6S8 592 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC159P0C7I6 412 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PNMTP11086 282 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 UBL4AP11441 157 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCL4P13236 92 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ICAM2P13598 275 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OSMP13725 252 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 FPR3P25089 353 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TTKP33981 857 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NBL1P41271 181 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 FOLR3P41439 243 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 STAT5AP42229 794 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RBM34P42696 430 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ACAA2P42765 397 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC6A8P48029 635 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RFX3P48380 749 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 GSSP48637 474 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMED10P49755 219 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NR0B1P51843 470 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF136P52737 540 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 LIMK1P53667 647 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NR1H2P55055 460 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CTBP2P56545 445 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC26A5P58743 744 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 GABARAPL2P60520 117 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPS15P62841 145 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL5RAQ01344 420 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TEKQ02763 1124 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRKCDQ05655 676 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CD47Q08722 323 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLCXD2Q0VAA5 305 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 TSPAN31Q12999 210 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 MAD2L1BPQ15013 274 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 NCF4Q15080 339 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 EBPQ15125 230 aaKnown RBP3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 SEC23BQ15437 767 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR1Q1Q15612 314 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 CCDC157Q569K6 752 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 C6orf141Q5SZD1 244 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 STPG1Q5TH74 334 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 FAAH2Q6GMR7 532 aa3.64□□□□□ -1.83
HMGB1P37-201ENST00000439613 WBP2NLQ6ICG8 309 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms