RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ULK2Q8IYT8 1036 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 EID3Q8N140 333 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 RBM15BQ8NDT2 890 aaKnown RBP17.33■□□□□ 0.36
HOXA9-202ENST00000396345 TNIP2Q8NFZ5 429 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 RASSF5Q8WWW0 418 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 SMPDL3BQ92485 455 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 CDRT15Q96T59 188 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 PRDM4Q9UKN5 801 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 SLC5A6Q9Y289 635 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 H0Y3Z8 333 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 EPPINO95925 133 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 IFNA14P01570 189 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 HOXD4P09016 255 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-202ENST00000396345 PRG2P13727 222 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 IL11P20809 199 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 CD247P20963 164 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 ME2P23368 584 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 ACVR2AP27037 513 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 ELK4P28324 431 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 KDELR2P33947 212 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 CPOXP36551 454 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 KCNJ5P48544 419 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 DLX5P56178 289 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 COPZ1P61923 177 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 RAC1P63000 192 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 MERTKQ12866 999 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 SF3B4Q15427 424 aaKnown RBP eCLIP17.32■□□□□ 0.36
HOXA9-202ENST00000396345 DUSP7Q16829 419 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 SAMD4BQ5PRF9 694 aaKnown RBP17.32■□□□□ 0.36
HOXA9-202ENST00000396345 COMTD1Q86VU5 262 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 UBQLNLQ8IYU4 475 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 MEIOBQ8N635 442 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 RNF148Q8N7C7 305 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 FIG4Q92562 907 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 PACSIN3Q9UKS6 424 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 MEMO1Q9Y316 297 aa17.32■□□□□ 0.36
HOXA9-202ENST00000396345 RELNP78509 3460 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 E9PLN8 166 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 SYT5O00445 386 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 CXCR6O00574 342 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 SEC14L5O43304 696 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 EFNA2O43921 213 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 LGI1O95970 557 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 C8BP07358 591 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 PTGER4P35408 488 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 APOBEC1P41238 236 aaKnown RBP17.31■□□□□ 0.36
HOXA9-202ENST00000396345 SLC1A3P43003 542 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 CRYBA2P53672 197 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 CLDN20P56880 219 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 HOXC5Q00444 222 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
HOXA9-202ENST00000396345 C1orf185Q5T7R7 199 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 MYO7BQ6PIF6 2116 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 PLEKHM3Q6ZWE6 761 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 GRINAQ7Z429 371 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 CADM2Q8N3J6 435 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 GPR32P1Q8NGA4 272 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 ZPLD1Q8TCW7 415 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 VKORC1Q9BQB6 163 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 TMEM185BQ9H7F4 350 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 EVA1AQ9H8M9 152 aa17.31■□□□□ 0.36
HOXA9-202ENST00000396345 H0YC42 278 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 SEMA7AO75326 666 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 OPN1LWP04000 364 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 FESP07332 822 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 HTR1EP28566 365 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 HTR3AP46098 478 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 SUCLG1P53597 346 aaKnown RBP17.3■□□□□ 0.36
HOXA9-202ENST00000396345 TPD52P55327 224 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-202ENST00000396345 RGS8P57771 180 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-202ENST00000396345 SELENBP1Q13228 472 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 ACSF3Q4G176 576 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-202ENST00000396345 RTL6Q6ICC9 239 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 WBP2NLQ6ICG8 309 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 TMEM211Q6ICI0 200 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 POMZP3Q6PJE2 187 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 B3GNT6Q6ZMB0 384 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 LILRA2Q8N149 483 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 ATP6V1C2Q8NEY4 427 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 ARHGDIGQ99819 225 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 TUBA1CQ9BQE3 449 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 CTPS2Q9NRF8 586 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 SERINC1Q9NRX5 453 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 ERRFI1Q9UJM3 462 aaPredicted RBP17.3■□□□□ 0.36
HOXA9-202ENST00000396345 FAM215AQ9Y5M1 114 aa17.3■□□□□ 0.36
HOXA9-202ENST00000396345 EIF1AYO14602 144 aaKnown RBP17.29■□□□□ 0.36
HOXA9-202ENST00000396345 HSD17B1P14061 328 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 GGT1P19440 569 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 TCN1P20061 433 aaPredicted RBP17.29■□□□□ 0.36
HOXA9-202ENST00000396345 SFTPDP35247 375 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 POLR2HP52434 150 aaKnown RBP17.29■□□□□ 0.36
HOXA9-202ENST00000396345 ZNF136P52737 540 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 PER3P56645 1201 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 CLDN15P56746 228 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 CBX1P83916 185 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 NRF1Q16656 503 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 SPATS1Q496A3 300 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 CYBRD1Q53TN4 286 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 MTFR2Q6P444 385 aa17.29■□□□□ 0.36
HOXA9-202ENST00000396345 CHMP1BQ7LBR1 199 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms