RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 CSF2RAP15509 400 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 RAB28P51157 221 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ZIC1Q15915 447 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 AANATQ16613 207 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 TMEM35AQ53FP2 167 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 TRMT12Q53H54 448 aaKnown RBP16.64■□□□□ 0.25
TRAF4-201ENST00000262395 MFSD12Q6NUT3 480 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ZNF614Q8N883 585 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 OR52E1Q8NGJ3 308 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 RPLP0P6Q8NHW5 317 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 TMEM239Q8WW34 195 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 TMEM74BQ9NUR3 256 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 SPATA2Q9UM82 520 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
TRAF4-201ENST00000262395 PCP4L1A6NKN8 68 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 HSD17B2P37059 387 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ERVK-21P61565 698 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 BDH1Q02338 343 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 HSF2Q03933 536 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ELAVL3Q14576 367 aaKnown RBP16.64■□□□□ 0.25
TRAF4-201ENST00000262395 OR1Q1Q15612 314 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 FIGNL1Q6PIW4 674 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 LINGO2Q7L985 606 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ADAMTS14Q8WXS8 1223 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 KCTD12Q96CX2 325 aaKnown RBP16.64■□□□□ 0.25
TRAF4-201ENST00000262395 OR14A2Q96R54 314 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 DDOQ99489 341 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 PDCD1LG2Q9BQ51 273 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ANKRD19PQ9H560 264 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ADGRL4Q9HBW9 690 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 CALML5Q9NZT1 146 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 RCE1Q9Y256 329 aa16.64■□□□□ 0.25
TRAF4-201ENST00000262395 ZNF860A6NHJ4 632 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 EPCAMP16422 314 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 PSMB10P40306 273 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 VEGFCP49767 419 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 CLDN12P56749 244 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 PUDPQ08623 228 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 COL28A1Q2UY09 1125 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 MRPL2Q5T653 305 aaKnown RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 HES5Q5TA89 166 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 RTL4Q6ZR62 310 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 NLRC3Q7RTR2 1065 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 GALNT11Q8NCW6 608 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 CACYBPQ9HB71 228 aaKnown RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 UBQLN2Q9UHD9 624 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 MAFFQ9ULX9 164 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 SCML1Q9UN30 329 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 INSL6Q9Y581 213 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 TRBV23OR9-2A0A075B6M9 112 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 FAM86C2PA6NEL3 165 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 LRRN3E7EW58 273 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 GDNFP39905 211 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 MTSS1LQ765P7 747 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 ANKRD33Q7Z3H0 272 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 TMIEQ8NEW7 156 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 TOR1AIP2Q8NFQ8 470 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 LGALS14Q8TCE9 139 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 BPIFA2Q96DR5 249 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 SEC22CQ9BRL7 303 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 C1QTNF7Q9BXJ2 289 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 TMEM168Q9H0V1 697 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 LRRN3Q9H3W5 708 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 FN3KQ9H479 309 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 MTHFD2LQ9H903 347 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 NUP50Q9UKX7 468 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 MEIKINA0A087WXM9 373 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 EDDM13A0A1B0GTR0 161 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 GATBO75879 557 aaKnown RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 RGS11O94810 467 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 SULT1A3P0DMM9 295 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 SULT1A4P0DMN0 295 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 EPXP11678 715 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 GALP22466 123 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 ITGB8P26012 769 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 TSPAN5P62079 268 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 ZC3H14Q6PJT7 736 aaKnown RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 BRIX1Q8TDN6 353 aaKnown RBP16.63■□□□□ 0.25
TRAF4-201ENST00000262395 C20orf85Q9H1P6 137 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
TRAF4-201ENST00000262395 UBL3O95164 117 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 IFNA7P01567 189 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 ZNF888P0CJ79 500 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-201ENST00000262395 CTRB1P17538 263 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 PPM1AP35813 382 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 GRK1Q15835 563 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 CTRB2Q6GPI1 263 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 MS4A15Q8N5U1 240 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 ZNF433Q8N7K0 673 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-201ENST00000262395 OR2L3Q8NG85 312 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 SLC7A5P2Q9GIP4 190 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 RDH8Q9NYR8 311 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 KCNE5Q9UJ90 142 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 ZNF223Q9UK11 482 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-201ENST00000262395 TRAPPC13A5PLN9 417 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 PEBP1P30086 187 aaKnown RBP16.62■□□□□ 0.25
TRAF4-201ENST00000262395 BLVRAP53004 296 aa16.62■□□□□ 0.25
TRAF4-201ENST00000262395 TMEM52BQ4KMG9 183 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms