RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GLUD1P00367 558 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TK1P04183 234 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CRHP06850 196 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CHRM2P08172 466 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 GUSBP08236 651 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TSPAN19P0C672 248 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 LINC00614P0C842 121 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 AREGP15514 252 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PPP3CBP16298 524 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 NCK1P16333 377 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ENGP17813 658 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TPSB2P20231 275 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CD80P33681 288 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 AHRP35869 848 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CASRP41180 1078 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 FRKP42685 505 aaPredicted RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 HTR5AP47898 357 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 VSX2P58304 361 aaPredicted RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PPIAP62937 165 aaKnown RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CDH18Q13634 790 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TPSAB1Q15661 275 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 MPPED2Q15777 294 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PLEKHN1Q494U1 663 aaPredicted RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ABHD17BQ5VST6 288 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 FAM198BQ6UWH4 519 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ZNF546Q86UE3 836 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PDZD3Q86UT5 571 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TMEM17Q86X19 198 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 RNF130Q86XS8 419 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 SIRT6Q8N6T7 355 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 OR11H7Q8NGC8 314 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 OR2L8Q8NGY9 312 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 STOML3Q8TAV4 291 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 OIT3Q8WWZ8 545 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 SEMA4DQ92854 862 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 HGDQ93099 445 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 FAM162AQ96A26 154 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 C3orf30Q96M34 536 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PKMYT1Q99640 499 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 IL1RL2Q9HB29 575 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 UBE2TQ9NPD8 197 aaPredicted RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 FZD3Q9NPG1 666 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 MRTO4Q9UKD2 239 aaKnown RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 POMT2Q9UKY4 750 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 CMAHPQ9Y471 501 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 TBL2Q9Y4P3 447 aaKnown RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 PCDHB1Q9Y5F3 818 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ORC6Q9Y5N6 252 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 IRAK3Q9Y616 596 aa4.4□□□□□ -1.7
LINC01109-201ENST00000603837 ZFC3H1O60293 1989 aaKnown RBP4.4□□□□□ -1.7
LINC01109-201ENST00000603837 DNAH12Q6ZR08 3092 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 TCRBV5S2A0A599 114 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 MYO1GB0I1T2 1018 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 ANKRD66B4E2M5 251 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 KLRC4-KLRK1H3BQV0 150 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 GPR31O00270 319 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 LYRM1O43325 122 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 NME2P1O60361 137 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 OR10H3O60404 316 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 FADS1O60427 444 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 EGFP01133 1207 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 IFNGR1P15260 489 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 NPR2P20594 1047 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 IL12BP29460 328 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 RPS19P39019 145 aaKnown RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 RBM34P42696 430 aaKnown RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 NOVP48745 357 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 CCR6P51684 374 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 C1QTNF8P60827 252 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 BIKQ13323 160 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 CLINT1Q14677 625 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 AMZ1Q400G9 498 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PDLIM3Q53GG5 364 aaPredicted RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PYCR3Q53H96 274 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PRSS36Q5K4E3 855 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 SLC35D3Q5M8T2 416 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 C8orf82Q6P1X6 216 aaPredicted RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PRSS57Q6UWY2 283 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 ALKAL2Q6UX46 152 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 UNQ6494/PRO21346Q6UXR6 183 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 SLC39A5Q6ZMH5 540 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 SSX6Q7RTT6 188 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 SLC34A3Q8N130 599 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 SVBPQ8N300 66 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 OR4Q3Q8NH05 313 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 UCN3Q969E3 161 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 ROPN1LQ96C74 230 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 R3HDM4Q96D70 268 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 TCEAL4Q96EI5 215 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 MED8Q96G25 268 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 BOD1Q96IK1 185 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PRMT6Q96LA8 375 aaPredicted RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 PRRC1Q96M27 445 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF385AQ96PM9 386 aaKnown RBP4.4□□□□□ -1.71
LINC01109-201ENST00000603837 RHNO1Q9BSD3 238 aa4.4□□□□□ -1.71
LINC01109-201ENST00000603837 JAM3Q9BX67 310 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms