RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 RABEP2Q9H5N1 569 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 ATP6V1HQ9UI12 483 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 C19orf53Q9UNZ5 99 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 MAGED1Q9Y5V3 778 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 GPR45Q9Y5Y3 372 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 A0A087WV62 115 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 GXYLT2A0PJZ3 443 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 MYO1GB0I1T2 1018 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 UPK1AO00322 258 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 TLX2O43763 284 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 CXCL13O43927 109 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 TBX19O60806 448 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 SLC22A3O75751 556 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 UTS2O95399 124 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 PLGP00747 810 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 IGKV1D-16P01601 117 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 IGHV4-39P01824 125 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 UFM1P61960 85 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 DECR1Q16698 335 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 TMEM107Q6UX40 140 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 BEND4Q6ZU67 534 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 GALNT10Q86SR1 603 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 NATD1Q8N6N6 113 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 OR7A2PQ8NGA2 310 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 SMAP2Q8WU79 429 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 S100PBPQ96BU1 408 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 OR10A4Q9H209 315 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 TAS2R7Q9NYW3 318 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 LIPT1Q9Y234 373 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 VDAC3Q9Y277 283 aa14.66□□□□□ -0.06
SHKBP1-215ENST00000597649 ADAMDEC1O15204 470 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 PDPK1O15530 556 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ADAM11O75078 769 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 GCM2O75603 506 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ANGPTL1O95841 491 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 IFNA2P01563 188 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 CD8AP01732 235 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 TP53P04637 393 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 PSMA4P25789 261 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 S100A3P33764 101 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 RFX3P48380 749 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 NCBP2P52298 156 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 C21orf58P58505 322 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 C17orf67Q0P5P2 114 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 PDE7AQ13946 482 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 SQLEQ14534 574 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ETFDHQ16134 617 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 GRAMD1BQ3KR37 738 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 NCMAPQ5T1S8 102 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 RIMKLAQ8IXN7 391 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 GLB1L3Q8NCI6 653 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ZFP28Q8NHY6 868 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 TRMT61AQ96FX7 289 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ZNF764Q96H86 408 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 C12orf49Q9H741 205 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 SDR39U1Q9NRG7 319 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 ZIM2Q9NZV7 527 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 RNF115Q9Y4L5 304 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 FREM1Q5H8C1 2179 aa14.65□□□□□ -0.06
SHKBP1-215ENST00000597649 A0A0J9YW62 118 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 TNFSF11O14788 317 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 CLOCKO15516 846 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GPRIN2O60269 458 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 SNX3O60493 162 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 SHOX2O60902 331 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 COQ9O75208 318 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 LAMP1P11279 417 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 AGTR1P30556 359 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 ATP4BP51164 291 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 PRR5P85299 388 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 DPY19L1Q2PZI1 675 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 PGGHGQ32M88 737 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GABRG1Q8N1C3 465 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 OR2L13Q8N349 312 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GTPBP8Q8N3Z3 284 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 VPS37AQ8NEZ2 397 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 OR2V1Q8NHB1 315 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 POC1BQ8TC44 478 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 C10orf82Q8WW14 230 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 TMEM158Q8WZ71 300 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 SLC9A6Q92581 669 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 COQ8BQ96D53 544 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 ZBED6CLQ96FA7 236 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 CCT8L2Q96SF2 557 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 LMF2Q9BU23 707 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 DUSP26Q9BV47 211 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 TBL1XR1Q9BZK7 514 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GLIPR2Q9H4G4 154 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GLRX2Q9NS18 164 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 MRGBPQ9NV56 204 aa14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 GDF2Q9UK05 429 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 MCTS1Q9ULC4 181 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-215ENST00000597649 A0A1W2PRB8 838 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 ANKRD28O15084 1053 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 GABRA3P34903 492 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 GPC1P35052 558 aa14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 CLK3P49761 638 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 MANFP55145 182 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-215ENST00000597649 FAPQ12884 760 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms