RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RPS19BP1Q86WX3 136 aaKnown RBP19.01■□□□□ 0.63
PNKP-203ENST00000593946 MISPQ8IVT2 679 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 CADM2Q8N3J6 435 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 ZNF426Q9BUY5 554 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 UCK2Q9BZX2 261 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 RYDENQ9NUL5 291 aaKnown RBP19.01■□□□□ 0.63
PNKP-203ENST00000593946 REV1Q9UBZ9 1251 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 NDRG4Q9ULP0 352 aaKnown RBP19.01■□□□□ 0.63
PNKP-203ENST00000593946 ICAM5Q9UMF0 924 aa19.01■□□□□ 0.63
PNKP-203ENST00000593946 CPAMD8Q8IZJ3 1885 aa19■□□□□ 0.63
PNKP-203ENST00000593946 C17orf51A8MQB3 221 aa19■□□□□ 0.63
PNKP-203ENST00000593946 LIPCP11150 499 aa19■□□□□ 0.63
PNKP-203ENST00000593946 OMPP47874 163 aa19■□□□□ 0.63
PNKP-203ENST00000593946 SLC6A8P48029 635 aa19■□□□□ 0.63
PNKP-203ENST00000593946 CCR4P51679 360 aa19■□□□□ 0.63
PNKP-203ENST00000593946 GAS1P54826 345 aa19■□□□□ 0.63
PNKP-203ENST00000593946 IL18R1Q13478 541 aa19■□□□□ 0.63
PNKP-203ENST00000593946 KEAP1Q14145 624 aa19■□□□□ 0.63
PNKP-203ENST00000593946 RTP5Q14D33 572 aa19■□□□□ 0.63
PNKP-203ENST00000593946 TGIF1Q15583 401 aa19■□□□□ 0.63
PNKP-203ENST00000593946 FCRLBQ6BAA4 426 aa19■□□□□ 0.63
PNKP-203ENST00000593946 RNF113BQ8IZP6 322 aaKnown RBP19■□□□□ 0.63
PNKP-203ENST00000593946 OR10G3Q8NGC4 313 aa19■□□□□ 0.63
PNKP-203ENST00000593946 PIGXQ8TBF5 258 aa19■□□□□ 0.63
PNKP-203ENST00000593946 DNAJA4Q8WW22 397 aaPredicted RBP19■□□□□ 0.63
PNKP-203ENST00000593946 TMEM239Q8WW34 195 aa19■□□□□ 0.63
PNKP-203ENST00000593946 KIAA1143Q96AT1 154 aaPredicted RBP19■□□□□ 0.63
PNKP-203ENST00000593946 SH3YL1Q96HL8 342 aaPredicted RBP19■□□□□ 0.63
PNKP-203ENST00000593946 MPP4Q96JB8 637 aa19■□□□□ 0.63
PNKP-203ENST00000593946 IP6K3Q96PC2 410 aa19■□□□□ 0.63
PNKP-203ENST00000593946 PITX2Q99697 317 aa19■□□□□ 0.63
PNKP-203ENST00000593946 GPA33Q99795 319 aa19■□□□□ 0.63
PNKP-203ENST00000593946 CDCP1Q9H5V8 836 aa19■□□□□ 0.63
PNKP-203ENST00000593946 RPS6KB2Q9UBS0 482 aa19■□□□□ 0.63
PNKP-203ENST00000593946 MED13Q9UHV7 2174 aa19■□□□□ 0.63
PNKP-203ENST00000593946 OR6B1O95007 311 aa19■□□□□ 0.63
PNKP-203ENST00000593946 CHN2P52757 468 aa19■□□□□ 0.63
PNKP-203ENST00000593946 ESRRGP62508 458 aa19■□□□□ 0.63
PNKP-203ENST00000593946 COX10Q12887 443 aa19■□□□□ 0.63
PNKP-203ENST00000593946 ZNF691Q5VV52 312 aa19■□□□□ 0.63
PNKP-203ENST00000593946 WBP2NLQ6ICG8 309 aa19■□□□□ 0.63
PNKP-203ENST00000593946 OPN5Q6U736 354 aa19■□□□□ 0.63
PNKP-203ENST00000593946 LINC00114Q6XXX2 140 aa19■□□□□ 0.63
PNKP-203ENST00000593946 PRICKLE2Q7Z3G6 844 aa19■□□□□ 0.63
PNKP-203ENST00000593946 NRMQ8IXM6 262 aa19■□□□□ 0.63
PNKP-203ENST00000593946 HRASLS5Q96KN8 279 aa19■□□□□ 0.63
PNKP-203ENST00000593946 KLHDC3Q9BQ90 382 aa19■□□□□ 0.63
PNKP-203ENST00000593946 PIP5K1CO60331 668 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 OSMP13725 252 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 GSSP48637 474 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 IDH2P48735 452 aaKnown RBP18.99■□□□□ 0.63
PNKP-203ENST00000593946 SSR4P51571 173 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 RPS6KA3P51812 740 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 MYBPC1Q00872 1141 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 RSPO4Q2I0M5 234 aaPredicted RBP18.99■□□□□ 0.63
PNKP-203ENST00000593946 C8orf59Q8N0T1 100 aaPredicted RBP18.99■□□□□ 0.63
PNKP-203ENST00000593946 RNF217Q8TC41 542 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 GNPDA2Q8TDQ7 276 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 C3orf49Q96BT1 292 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 HS6ST2Q96MM7 605 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 PNPLA3Q9NST1 481 aa18.99■□□□□ 0.63
PNKP-203ENST00000593946 KLF4O43474 513 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 LIFP15018 202 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 MST1P26927 711 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 RBM34P42696 430 aaKnown RBP18.98■□□□□ 0.63
PNKP-203ENST00000593946 P2RX1P51575 399 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 RPP38P78345 283 aaKnown RBP18.98■□□□□ 0.63
PNKP-203ENST00000593946 TSPAN31Q12999 210 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 RAPSNQ13702 412 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 DND1Q8IYX4 353 aaKnown RBP18.98■□□□□ 0.63
PNKP-203ENST00000593946 OR5W2Q8NH69 310 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 DUSP19Q8WTR2 217 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 ASB15Q8WXK1 588 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 ZNF524Q96C55 264 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 FAM46AQ96IP4 442 aaKnown RBP18.98■□□□□ 0.63
PNKP-203ENST00000593946 GALNT9Q9HCQ5 603 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 SELENONQ9NZV5 590 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 CNIH4Q9P003 139 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 GMPPBQ9Y5P6 360 aa18.98■□□□□ 0.63
PNKP-203ENST00000593946 CHCHD2Q9Y6H1 151 aaPredicted RBP18.98■□□□□ 0.63
PNKP-203ENST00000593946 TP53P04637 393 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 LYNP07948 512 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 PTNP21246 168 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 GSTM3P21266 225 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 CHMP24386 653 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 FPR3P25089 353 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 PTGDSP41222 190 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 C17orf67Q0P5P2 114 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 BICRALQ6AI39 1079 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 Q6ZPB1 254 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 THAP5Q7Z6K1 395 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 MEX3DQ86XN8 651 aaKnown RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 KRCC1Q9NPI7 259 aaPredicted RBP18.97■□□□□ 0.63
PNKP-203ENST00000593946 KLRF1Q9NZS2 232 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 A0A087WUJ7 227 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 TP53I11O14683 189 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 SLC1A3P43003 542 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 CRISP1P54107 249 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 ISL1P61371 349 aa18.97■□□□□ 0.63
PNKP-203ENST00000593946 ALDH6A1Q02252 535 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms