RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CHRM4P08173 479 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 NID1P14543 1247 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 ME2P23368 584 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 ELK4P28324 431 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 PGM1P36871 562 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 AQP5P55064 265 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 TXNL4AP83876 142 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 PLAURQ03405 335 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 MAPK11Q15759 364 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 GTDC1Q4AE62 458 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 TIGD2Q4W5G0 525 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 GPAT3Q53EU6 434 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 DNAJC14Q6Y2X3 702 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 EIF3MQ7L2H7 374 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 HMGN2P46Q86SG4 172 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 KIF18BQ86Y91 864 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 FUNDC1Q8IVP5 155 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 ZZZ3Q8IYH5 903 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 FAM71CQ8NEG0 241 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 TOR1AIP2Q8NFQ8 470 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 ITCHQ96J02 903 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 MRGPRX4Q96LA9 322 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 MAGEB18Q96M61 343 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 THUMPD3Q9BV44 507 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 QRSL1Q9H0R6 528 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 PAQR5Q9NXK6 330 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 GALNT8Q9NY28 637 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 PACSIN3Q9UKS6 424 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 LIPT1Q9Y234 373 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 CCDC168Q8NDH2 2452 aa16.58■□□□□ 0.24
SHKBP1-202ENST00000593764 FAM221AA4D161 298 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 CLDN24A6NM45 220 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 MSTNO14793 375 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 KRT75O95678 551 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 UBTFL6P0CB48 400 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 CAPN3P20807 821 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 SORDQ00796 357 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 CBFBQ13951 182 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 QPRTQ15274 297 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 HBMQ6B0K9 141 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 LRRC74BQ6ZQY2 392 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 TMCO5AQ8N6Q1 288 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 CNEP1R1Q8N9A8 125 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 OSTF1Q92882 214 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 KLHL15Q96M94 604 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 RMND5AQ9H871 391 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 SLC52A3Q9NQ40 469 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 ABCA4P78363 2273 aa16.57■□□□□ 0.24
SHKBP1-202ENST00000593764 AKAP6Q13023 2319 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 CTAG2O75638 210 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 CYP7B1O75881 506 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 HOXB9P17482 250 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 SFTPDP35247 375 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 MAGEA8P43361 318 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 CCR4P51679 360 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 CARD18P57730 90 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 KCNJ10P78508 379 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 ZNF474Q6S9Z5 364 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 LINC01560Q8TB33 94 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 FAM222BQ8WU58 562 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 AURKBQ96GD4 344 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 PAIP1Q9H074 479 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 TPT1P8Q9HAU6 139 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 SLC35A3Q9Y2D2 325 aa16.56■□□□□ 0.24
SHKBP1-202ENST00000593764 TUBAL3A6NHL2 446 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 AGAP5A6NIR3 686 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 ADAM11O75078 769 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 SMNDC1O75940 238 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 ANP32DO95626 131 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 NR2F1P10589 423 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 FCGR2AP12318 317 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 ETFAP13804 333 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 CD1EP15812 388 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 RPS4Y1P22090 263 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 CPA2P48052 419 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 SESN3P58005 492 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 STX1BP61266 288 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 SIRPAP78324 504 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 DAZAP2Q15038 168 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 TMEM176BQ3YBM2 270 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 SLC2A7Q6PXP3 512 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 BLOC1S3Q6QNY0 202 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 FAM214BQ7L5A3 538 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 LURAP1LQ8IV03 231 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 ST8SIA1Q92185 356 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 SRXN1Q9BYN0 137 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 PRRG4Q9BZD6 226 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 OPN3Q9H1Y3 402 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 MTHFD2LQ9H903 347 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 PCDHB14Q9Y5E9 798 aa16.55■□□□□ 0.24
SHKBP1-202ENST00000593764 HRNRQ86YZ3 2850 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-202ENST00000593764 CD8BP10966 210 aa16.54■□□□□ 0.24
SHKBP1-202ENST00000593764 EPXP11678 715 aa16.54■□□□□ 0.24
SHKBP1-202ENST00000593764 PGCP20142 388 aa16.54■□□□□ 0.24
SHKBP1-202ENST00000593764 PCYT1AP49585 367 aa16.54■□□□□ 0.24
SHKBP1-202ENST00000593764 HPCAP84074 193 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms