RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SS18L1O75177 396 aaPredicted RBP14.48□□□□□ -0.09
DDX55-212ENST00000544738 OPN1LWP04000 364 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 DHRS4L1P0CG22 281 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 CRYGSP22914 178 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 SLC6A8P48029 635 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 SLC1A6P48664 564 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 OR4F3Q6IEY1 312 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 PLEKHM3Q6ZWE6 761 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 C6orf120Q7Z4R8 191 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 OR8J2Q8NGG1 315 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 OR5AK3PQ8NH89 298 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 POC1BQ8TC44 478 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 KLHL15Q96M94 604 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 SDF2Q99470 211 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 DPY30Q9C005 99 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 CENPHQ9H3R5 247 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 TMEM185BQ9H7F4 350 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 RAB21Q9UL25 225 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 CARD8Q9Y2G2 431 aa14.48□□□□□ -0.09
DDX55-212ENST00000544738 NUP214P35658 2090 aaPredicted RBP14.47□□□□□ -0.09
DDX55-212ENST00000544738 NPIPB9F8W1W9 429 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 ZNF195O14628 629 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 EIF4E2O60573 245 aaKnown RBP14.47□□□□□ -0.09
DDX55-212ENST00000544738 STX11O75558 287 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 AGR2O95994 175 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 PPP3CBP16298 524 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 MATN1P21941 496 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 FOXF1Q12946 379 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 CAPRIN1Q14444 709 aaKnown RBP14.47□□□□□ -0.09
DDX55-212ENST00000544738 DPY19L1Q2PZI1 675 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 CEP85LQ5SZL2 805 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 ANXA8L1Q5VT79 327 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 CBLN3Q6UW01 205 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 BEND4Q6ZU67 534 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 ZNF614Q8N883 585 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 TOR1AIP2Q8NFQ8 470 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 FBXO27Q8NI29 283 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 GPR119Q8TDV5 335 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 CPNE4Q96A23 557 aaPredicted RBP14.47□□□□□ -0.09
DDX55-212ENST00000544738 ARL8AQ96BM9 186 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 PPP1R36Q96LQ0 422 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 KLHL4Q9C0H6 718 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 NMUR2Q9GZQ4 415 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 KCNK9Q9NPC2 374 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 EXD2Q9NVH0 621 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 HAO1Q9UJM8 370 aa14.47□□□□□ -0.09
DDX55-212ENST00000544738 NPIPA5A0A0B4J1W7 369 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 RNF103-CHMP3A0A140T963 221 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 PRSS51A0A1B0GVH4 220 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 NPIPA7E9PJI5 369 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 ZNF264O43296 627 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 NPIPA8P0DM63 369 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 LBPP18428 481 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 CCKARP32238 428 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 SFTPDP35247 375 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 CLNS1AP54105 237 aaKnown RBP14.46□□□□□ -0.09
DDX55-212ENST00000544738 ATP5J2P56134 94 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 STX3Q13277 289 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 RNPS1Q15287 305 aaKnown RBP14.46□□□□□ -0.09
DDX55-212ENST00000544738 EXOC3L2Q2M3D2 409 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 CHRFAM7AQ494W8 412 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 TNFAIP8L3Q5GJ75 292 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.46□□□□□ -0.09
DDX55-212ENST00000544738 CLECL1Q8IZS7 167 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 OR5W2Q8NH69 310 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 MIPOL1Q8TD10 442 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 TMEM171Q8WVE6 324 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 TESCQ96BS2 214 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 SLC35G5Q96KT7 338 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 MRGPRX4Q96LA9 322 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 SORT1Q99523 831 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 KLHDC3Q9BQ90 382 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 C20orf27Q9GZN8 174 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 CLEC4AQ9UMR7 237 aa14.46□□□□□ -0.09
DDX55-212ENST00000544738 WIPF1O43516 503 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 UBL4AP11441 157 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 PRKCAP17252 672 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 UQCRC2P22695 453 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 RPS26P62854 115 aaKnown RBP14.45□□□□□ -0.1
DDX55-212ENST00000544738 CBFBQ13951 182 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 VEZF1Q14119 521 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 ZNF141Q15928 474 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 ZNF239Q16600 458 aaKnown RBP14.45□□□□□ -0.1
DDX55-212ENST00000544738 ARHGAP11BQ3KRB8 267 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 TMEM176BQ3YBM2 270 aaPredicted RBP14.45□□□□□ -0.1
DDX55-212ENST00000544738 SLC25A53Q5H9E4 307 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 ATAD3BQ5T9A4 648 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.45□□□□□ -0.13e-7■■■■■ 27.9
DDX55-212ENST00000544738 C16orf62Q7Z3J2 963 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 OR4A15Q8NGL6 344 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 RNF128Q8TEB7 428 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 OIT3Q8WWZ8 545 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 ZC3HAV1LQ96H79 300 aaKnown RBP14.45□□□□□ -0.1
DDX55-212ENST00000544738 GP6Q9HCN6 339 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
DDX55-212ENST00000544738 SERINC4A6NH21 518 aa14.44□□□□□ -0.1
DDX55-212ENST00000544738 OIP5O43482 229 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms