RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ARHGAP21Q5T5U3 1957 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 A0A0J9YW62 118 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 LOC100653049A0A140TA62 436 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 A0A1W2PNR3 127 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 A0A1W2PP18 115 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 MBD3L4A6NDZ8 208 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 MBD3L3A6NE82 208 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 MBD3L5A6NJ08 208 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 KRT34O76011 436 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 RCBTB2O95199 551 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 DBIP07108 87 aaKnown RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 GKN3PP0CG01 181 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 ZNF17P17021 662 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 PRKCAP17252 672 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SLC7A1P30825 629 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 PGM1P36871 562 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 IDH2P48735 452 aaKnown RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 GYS2P54840 703 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SUMO3P55854 103 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 CARD18P57730 90 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SESN3P58005 492 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 RAC1P63000 192 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 TXNL4AP83876 142 aaKnown RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 MYBPHQ13203 477 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SKP2Q13309 424 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SLC25A35Q3KQZ1 300 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 CGB2Q6NT52 195 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 DHDDSQ86SQ9 333 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 LSRQ86X29 649 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 RELL2Q8NC24 303 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 OR10D3Q8NH80 312 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 OR2V1Q8NHB1 315 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 MBD3L2Q8NHZ7 208 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 NFKBIDQ8NI38 313 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SLC38A5Q8WUX1 472 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 TMEM234Q8WY98 164 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 ROBO4Q8WZ75 1007 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 ZNF524Q96C55 264 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 REXO5Q96IC2 774 aaKnown RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 KLHL15Q96M94 604 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SAP130Q9H0E3 1048 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 PIF1Q9H611 641 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SERINC1Q9NRX5 453 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 RLIMQ9NVW2 624 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 SLC25A37Q9NYZ2 338 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 CALML5Q9NZT1 146 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 VAPAQ9P0L0 249 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 CLCF1Q9UBD9 225 aa9.94□□□□□ -0.82
DDB1-222ENST00000543627 ZNF629Q9UEG4 869 aaPredicted RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 MCTS1Q9ULC4 181 aaKnown RBP9.94□□□□□ -0.82
DDB1-222ENST00000543627 IGHV3-15A0A0B4J1V0 119 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 AGAP5A6NIR3 686 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 GJE1A6NN92 205 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 AP3D1O14617 1153 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 EFNA2O43921 213 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 TFPTP0C1Z6 253 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 PPIBP23284 216 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 SHC1P29353 583 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 AQP1P29972 269 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 CPOXP36551 454 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 SLC6A8P48029 635 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 KCNJ5P48544 419 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 MRPL19P49406 292 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 MVDP53602 400 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 IRX1P78414 480 aaPredicted RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 CAPRIN1Q14444 709 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 LARS2Q15031 903 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 TMEM44Q2T9K0 475 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 ZNF311Q5JNZ3 666 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 MRPL2Q5T653 305 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 METTL21CQ5VZV1 264 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 CRYBG3Q68DQ2 2970 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 OR2A2Q6IF42 318 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 ESPNLQ6ZVH7 1005 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 GGNQ86UU5 652 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 CADM2Q8N3J6 435 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 OR5B2Q96R09 309 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 ELAC2Q9BQ52 826 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 RBM24Q9BX46 236 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 TIGARQ9NQ88 270 aa9.93□□□□□ -0.82
DDB1-222ENST00000543627 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 THUMPD1Q9NXG2 353 aaKnown RBP9.93□□□□□ -0.82
DDB1-222ENST00000543627 CACNA1DQ01668 2161 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 A0A0G2JPF8 293 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 HNRNPCL2B2RXH8 293 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 HNRNPCL3B7ZW38 293 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 HNRNPCL1O60812 293 aaKnown RBP9.92□□□□□ -0.82
DDB1-222ENST00000543627 AQP8O94778 261 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 HNRNPCL4P0DMR1 293 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 PRF1P14222 555 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 SLC6A2P23975 617 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 PSMA4P25789 261 aaKnown RBP9.92□□□□□ -0.82
DDB1-222ENST00000543627 ADH6P28332 368 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 ASCL1P50553 236 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 SEC24CP53992 1094 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 CTBP2P56545 445 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 MTPNP58546 118 aa9.92□□□□□ -0.82
DDB1-222ENST00000543627 KLF10Q13118 480 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms