RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 CLDN15P56746 228 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 CLDN18P56856 261 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 CARD18P57730 90 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MTPNP58546 118 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 EEF1A1P68104 462 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MERTKQ12866 999 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 FOXF1Q12946 379 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 SKP2Q13309 424 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 CAPRIN1Q14444 709 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MRPL2Q5T653 305 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 EEF1A1P5Q5VTE0 462 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 AP1ARQ63HQ0 302 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 REP15Q6BDI9 236 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 OR2A2Q6IF42 318 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 ZNF550Q7Z398 422 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 VRK2Q86Y07 508 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MSRB3Q8IXL7 192 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MARVELD2Q8N4S9 558 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 C11orf65Q8NCR3 313 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 ST8SIA1Q92185 356 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 WNT2BQ93097 391 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 ARSGQ96EG1 525 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 PINK1Q9BXM7 581 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 EFCAB1Q9HAE3 211 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 BCL2L10Q9HD36 194 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 KLHL28Q9NXS3 571 aa11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 KLF2Q9Y5W3 355 aaPredicted RBP11.31□□□□□ -0.6
CYB561A3-213ENST00000539890 GCN1Q92616 2671 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 A0A0G2JNJ9 132 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 CENPVL1A0A0U1RR11 272 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 PRORSD1PA6NEY8 169 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 B4DXG7 233 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 AIM2O14862 343 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 SNX3O60493 162 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 PLGP00747 810 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 THBS1P07996 1170 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ARAFP10398 606 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TFPIP10646 304 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 FCGR2AP12318 317 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 BMP2P12643 396 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 COX4I1P13073 169 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ETS2P15036 469 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 PRKCAP17252 672 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 DRD4P21917 467 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 BMP5P22003 454 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ELK4P28324 431 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 OPRM1P35372 400 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 APOBEC1P41238 236 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 SESN3P58005 492 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 RBBP4Q09028 425 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TOMM34Q15785 309 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 INTS11Q5TA45 600 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 HBMQ6B0K9 141 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 GTF2IRD2BQ6EKJ0 949 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 NANOGP8Q6NSW7 305 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ESPNLQ6ZVH7 1005 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 MCEMP1Q8IX19 187 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 HIPK4Q8NE63 616 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TNIP2Q8NFZ5 429 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 OR10A6Q8NH74 314 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 CNOT9Q92600 299 aaKnown RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 CPPED1Q9BRF8 314 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 PIF1Q9H611 641 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 TMEM38AQ9H6F2 299 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 NANOGQ9H9S0 305 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 RPS6KB2Q9UBS0 482 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 Q9UFV3 132 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 AP3M1Q9Y2T2 418 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 GMEB1Q9Y692 573 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
CYB561A3-213ENST00000539890 POLEQ07864 2286 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 FBP2O00757 339 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 TNFSF11O14788 317 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 DCTN3O75935 186 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 CLDN1O95832 211 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 HOXB9P17482 250 aaPredicted RBP11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 CTSSP25774 331 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 FKBP2P26885 142 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 AQP1P29972 269 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 SUCLG1P53597 346 aaKnown RBP11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 CLDN20P56880 219 aa11.29□□□□□ -0.6
CYB561A3-213ENST00000539890 NCALDP61601 193 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms