RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZBTB44Q8NCP5 570 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TMEM27Q9HBJ8 222 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ACSS1Q9NUB1 689 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ICKQ9UPZ9 632 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 PPIL1Q9Y3C6 166 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 NUBP2Q9Y5Y2 271 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TRPM6Q9BX84 2022 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LRIT2A6NDA9 550 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 FAM25EA8MYX2 175 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 PEX12O00623 359 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 WNT1P04628 370 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 GBX2P52951 348 aaPredicted RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 PITPNAQ00169 270 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 SLITRK4Q8IW52 837 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 GJD3Q8N144 294 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 TMEM239Q8WW34 195 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 BPIFA2Q96DR5 249 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 HS6ST2Q96MM7 605 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 SFXN2Q96NB2 322 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 INSM2Q96T92 566 aaPredicted RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 CYSLTR2Q9NS75 346 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 SAGE1Q9NXZ1 904 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 CALML5Q9NZT1 146 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 MYEF2Q9P2K5 600 aaKnown RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 CENPVL1A0A0U1RR11 272 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 UBE2QL1A1L167 161 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 OR6C74A6NCV1 312 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 DRD2P14416 443 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 AK4P27144 223 aaPredicted RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 NUP62P37198 522 aaPredicted RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 GDI2P50395 445 aaKnown RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 PCBP4P57723 403 aaKnown RBP11.82□□□□□ -0.52
VPS52-218ENST00000482399 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 AKIRIN2Q53H80 203 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 AADACL4Q5VUY2 407 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 C12orf40Q86WS4 652 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 HSPA12BQ96MM6 686 aa11.82□□□□□ -0.52
VPS52-218ENST00000482399 PRRT4C9JH25 899 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 BLOC1S5-TXNDC5H3BN57 136 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 CASC3O15234 703 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR10H2O60403 315 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 RCBTB2O95199 551 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 HLA-DQA2P01906 255 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 MAS1P04201 325 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 CSF2RAP15509 400 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ATF1P18846 271 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 GABRA3P34903 492 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 MTNR1BP49286 362 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 SELENOPP49908 381 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 C4orf46Q504U0 113 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TMEM69Q5SWH9 247 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR14C36Q8NHC7 312 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TNFRSF13CQ96RJ3 184 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TEAD3Q99594 435 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS52-218ENST00000482399 DPEP2Q9H4A9 486 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 RTTNQ86VV8 2226 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 CDH23Q9H251 3354 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TP53BP1Q12888 1972 aaPredicted RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 GMDSO60547 372 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 EPPINO95925 133 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 IFNGP01579 166 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TFPIP10646 304 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ATP5A1P25705 553 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 OMPP47874 163 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 PRDX1Q06830 199 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 OPCMLQ14982 345 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 LGALSLQ3ZCW2 172 aaPredicted RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 MRPL2Q5T653 305 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 FAAH2Q6GMR7 532 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 THSD4Q6ZMP0 1018 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ERN2Q76MJ5 926 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 HDDC2Q7Z4H3 204 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 SLC35A4Q96G79 324 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR52A5Q9H2C5 316 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 SPHK1Q9NYA1 384 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 GBF1Q92538 1859 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 SLC22A31A6NKX4 558 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 DUXAA6NLW8 204 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 C1QTNF3-AMACRE9PGA6 284 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 SGK494L7N484 410 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 MAN2B1O00754 1011 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 NARSO43776 548 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 PRKNO60260 465 aaPredicted RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 ARL6IP5O75915 188 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 LIPCP11150 499 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 C4BPBP20851 252 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 CFL1P23528 166 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 RBMS1P29558 406 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 FOXK2Q01167 660 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TRMT12Q53H54 448 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms