RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CREBL2O60519 120 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 KHDRBS3O75525 346 aaKnown RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 RLN2P04090 185 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ASGR1P07306 291 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ITGB8P26012 769 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 PYCR1P32322 319 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 OR1D2P34982 312 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 FNTBP49356 437 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 POM121L1PQ3SYA9 428 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 SPOUT1Q5T280 376 aaKnown RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 FCRLBQ6BAA4 426 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 TMEM88Q6PEY1 159 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 TMEM220Q6QAJ8 160 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF620Q6ZNG0 422 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 GHSRQ92847 366 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 IL20Q9NYY1 176 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ACTR10Q9NZ32 417 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 SLC5A10A0PJK1 596 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 SYNDIG1LA6NDD5 238 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 TBX6O95947 436 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 PPP3CBP16298 524 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 PCBP4P57723 403 aaKnown RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 CAMK1Q14012 370 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF660Q6AZW8 331 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 OR5J2Q8NH18 312 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 LCORQ96JN0 433 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-207ENST00000470763 EMC3Q9P0I2 261 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 MLXQ9UH92 298 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 PLPP2O43688 288 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 MT-ND5P03915 603 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 IFNGR1P15260 489 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 MC2RQ01718 297 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 TMEM44Q2T9K0 475 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF311Q5JNZ3 666 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 HEPHL1Q6MZM0 1159 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 SLC24A5Q71RS6 500 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 PXKQ7Z7A4 578 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 SPICQ8N5J4 248 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 ARL14EPQ8N8R7 260 aaPredicted RBP12.77□□□□□ -0.36
NPHP4-207ENST00000470763 FAM98AQ8NCA5 519 aaKnown RBP12.77□□□□□ -0.36
NPHP4-207ENST00000470763 FAM71CQ8NEG0 241 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.36
NPHP4-207ENST00000470763 UBQLN3Q9H347 655 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 ANKRD19PQ9H560 264 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 SLC13A4Q9UKG4 626 aa12.77□□□□□ -0.36
NPHP4-207ENST00000470763 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 TMPRSS11DO60235 418 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 FMO6PO60774 539 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 SLC11A1P49279 550 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 LGALS3BPQ08380 585 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 KLHDC8AQ8IYD2 350 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 CFAP206Q8IYR0 622 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 AMER3Q8N944 861 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 DIO2Q92813 273 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ELP4Q96EB1 424 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 C16orf58Q96GQ5 468 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ESRP2Q9H6T0 727 aaKnown RBP12.77□□□□□ -0.37
NPHP4-207ENST00000470763 EQTNQ9NQ60 294 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 CYB5R1Q9UHQ9 305 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 MTCL1Q9Y4B5 1905 aaKnown RBP12.77□□□□□ -0.37
NPHP4-207ENST00000470763 FEZF1A0PJY2 475 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 H7C2Y5 167 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ABCD4O14678 606 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 PPM1DO15297 605 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 FLRT2O43155 660 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 SIGLEC6O43699 453 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 HYAL3O43820 417 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-207ENST00000470763 HIST1H2ABP04908 130 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 CLUP10909 449 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ZNF35P13682 527 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 H2BFSP57053 126 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 C6orf132Q5T0Z8 1188 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 FAM69AQ5T7M9 428 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 HES5Q5TA89 166 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 B3GNTL1Q67FW5 361 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-207ENST00000470763 Q6ZVU0 165 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 HIST3H2AQ7L7L0 130 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 OR5M9Q8NGP3 310 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 PRUNE2Q8WUY3 3088 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 HIST1H2ACQ93077 130 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 GLIPR2Q9H4G4 154 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 STARD7Q9NQZ5 370 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 MED11Q9P086 117 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 ERVK-19Q9WJR5 959 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.37
NPHP4-207ENST00000470763 CDHR4A6H8M9 788 aa12.76□□□□□ -0.37
NPHP4-207ENST00000470763 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
NPHP4-207ENST00000470763 GSTZ1O43708 216 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-207ENST00000470763 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
NPHP4-207ENST00000470763 SAGP10523 405 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms