RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MAPKAPK5-AS1Q8N8E1 139 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZSCAN4Q8NAM6 433 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SPC24Q8NBT2 197 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CCNYQ8ND76 341 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 NEK11Q8NG66 645 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 B4GALNT2Q8NHY0 566 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 POP5Q969H6 163 aaKnown RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 GMPPAQ96IJ6 420 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ADGRG7Q96K78 797 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ATOH8Q96SQ7 321 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 CENPOQ9BU64 300 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 MAK16Q9BXY0 300 aaKnown RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ACTRT3Q9BYD9 372 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 TPK1Q9H3S4 243 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 GLOD4Q9HC38 313 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 GPR35Q9HC97 309 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZMAT5Q9UDW3 170 aaKnown RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 SEC14L4Q9UDX3 406 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 IP6K2Q9UHH9 426 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 FBXL2Q9UKC9 423 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 AMFRQ9UKV5 643 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 NENFQ9UMX5 172 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 ZNF337Q9Y3M9 751 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 LSM4Q9Y4Z0 139 aaKnown RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 AUP1Q9Y679 476 aa4.16□□□□□ -1.74
SDCBP-205ENST00000447267 V9GYY5 206 aaPredicted RBP4.16□□□□□ -1.74
SDCBP-205ENST00000447267 KCNE1BA0A087WTH5 132 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 LINC01548A6NM66 108 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 B9A039 149 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 F5H697 171 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 PSMA7O14818 248 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ICOSLGO75144 302 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 MTRF1O75570 445 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 CBR3O75828 277 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF432O94892 652 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 GNA14O95837 355 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 EPOP01588 193 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 FTH1P02794 183 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ADRA2AP08913 450 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 OR4A8P0C604 315 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 FERP16591 822 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 DESP17661 470 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TCN1P20061 433 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 MYF6P23409 242 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TIA1P31483 386 aaKnown RBP eCLIP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ARHGAP25P42331 645 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TMED10P49755 219 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ATP4BP51164 291 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SH3BGRP55822 239 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ID2Q02363 134 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SLC25A11Q02978 314 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SLAMF1Q13291 335 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 MSLNQ13421 630 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 CUL4AQ13619 759 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 RPS6KA1Q15418 735 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TAF1AQ15573 450 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 KLHDC7AQ5VTJ3 777 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 OR5M10Q6IEU7 315 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 CAPN13Q6MZZ7 669 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 NPNTQ6UXI9 565 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TFAP2EQ6VUC0 442 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 EXOC3L1Q86VI1 746 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 PEX5LQ8IYB4 626 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 PRR22Q8IZ63 422 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SLC7A5P1Q8MH63 180 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 RAB42Q8N4Z0 105 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 PQLC3Q8N755 202 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 CEP112Q8N8E3 955 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 FAM76AQ8TAV0 307 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 NUBPLQ8TB37 319 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 FAM81AQ8TBF8 368 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SKA2Q8WVK7 121 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SMPDL3AQ92484 453 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 DAZLQ92904 295 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 YIPF5Q969M3 257 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SENP5Q96HI0 755 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 OXNAD1Q96HP4 312 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 DHTKD1Q96HY7 919 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ITCHQ96J02 903 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 OSBPL9Q96SU4 736 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 SH3GL1Q99961 368 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 TSPY26PQ9H489 355 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 GOLPH3LQ9H4A5 285 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 PLK3Q9H4B4 646 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 C16orf95Q9H693 158 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ACTR8Q9H981 624 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF275Q9NSD4 429 aaPredicted RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 MRPL15Q9P015 296 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 EXO1Q9UQ84 846 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 MMACHCQ9Y4U1 282 aa4.15□□□□□ -1.75
SDCBP-205ENST00000447267 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.75
SDCBP-205ENST00000447267 HSPG2P98160 4391 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 C17orf51A8MQB3 221 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 C4orf51C9J302 202 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 PDLIM1O00151 329 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 MGRN1O60291 552 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 CEP104O60308 925 aa4.14□□□□□ -1.75
SDCBP-205ENST00000447267 OR1I1O60431 355 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms