RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NDE1Q9NXR1 346 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ABCD2Q9UBJ2 740 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF337Q9Y3M9 751 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 CHST2Q9Y4C5 530 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ELOVL7A1L3X0 281 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 CFAP73A6NFT4 308 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 MFN2O95140 757 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 CALB2P22676 271 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 STARP49675 285 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 GSK3BP49841 420 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 LHX2P50458 406 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 EEFSECP57772 596 aaKnown RBP17.36■□□□□ 0.37
HOXA9-202ENST00000396345 DMTNQ08495 405 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 FOXF1Q12946 379 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 EMC4Q5J8M3 183 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF585AQ6P3V2 769 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 C16orf89Q6UX73 402 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 CCDC80Q76M96 950 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 PGAM4Q8N0Y7 254 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 BHLHE22Q8NFJ8 381 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF563Q8TA94 476 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 POC1BQ8TC44 478 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 TMEM234Q8WY98 164 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ST8SIA1Q92185 356 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 RNF145Q96MT1 663 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 NPAS1Q99742 590 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 RSPO3Q9BXY4 272 aaPredicted RBP17.36■□□□□ 0.37
HOXA9-202ENST00000396345 PRDM14Q9GZV8 571 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ALG2Q9H553 416 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ALKBH4Q9NXW9 302 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 ADA2Q9NZK5 511 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 TMEM181Q9P2C4 612 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 GMPR2Q9P2T1 348 aaKnown RBP17.36■□□□□ 0.37
HOXA9-202ENST00000396345 CAMK2AQ9UQM7 478 aa17.36■□□□□ 0.37
HOXA9-202ENST00000396345 HIVEP3Q5T1R4 2406 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 A0A1B0GUH1 482 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 B2RBV5 119 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 AP3D1O14617 1153 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 TPST1O60507 370 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 OPN1SWP03999 348 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 GKN3PP0CG01 181 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 T-ENOLP0DO92 83 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 PEPDP12955 493 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 UQCRBP14927 111 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 PRKCAP17252 672 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 POU3F2P20265 443 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-202ENST00000396345 ADH6P28332 368 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 KCNC4Q03721 635 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 EPS8Q12929 822 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF550Q7Z398 422 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 PM20D2Q8IYS1 436 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 SLC26A7Q8TE54 656 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF524Q96C55 264 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 WDYHV1Q96HA8 205 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 MRGPRX4Q96LA9 322 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 KCTD14Q9BQ13 255 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-202ENST00000396345 PINK1Q9BXM7 581 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 TP63Q9H3D4 680 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-202ENST00000396345 ACER3Q9NUN7 267 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 SLC13A4Q9UKG4 626 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 AP4B1Q9Y6B7 739 aa17.35■□□□□ 0.37
HOXA9-202ENST00000396345 FIGNL2A6NMB9 653 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 H3BML4 177 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 GSTA4O15217 222 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 LRRTM2O43300 516 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 ADAM11O75078 769 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 GP1BBP13224 206 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 CPN1P15169 458 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 PSMA4P25789 261 aaKnown RBP17.34■□□□□ 0.37
HOXA9-202ENST00000396345 IDH2P48735 452 aaKnown RBP17.34■□□□□ 0.37
HOXA9-202ENST00000396345 SESN3P58005 492 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 SRYQ05066 204 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 BCL2A1Q16548 175 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 C4orf17Q53FE4 359 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 SLC25A53Q5H9E4 307 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 C3P1Q6ZMU1 363 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 DEFB107AQ8IZN7 70 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 SMYD1Q8NB12 490 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 SLC35B4Q969S0 331 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 RELTQ969Z4 430 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 KLHL28Q9NXS3 571 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 STOML1Q9UBI4 398 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 TENM4Q6N022 2769 aa17.34■□□□□ 0.37
HOXA9-202ENST00000396345 AHRRA9YTQ3 701 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 ETV2O00321 342 aaPredicted RBP17.33■□□□□ 0.36
HOXA9-202ENST00000396345 FAAHO00519 579 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 CCL21O00585 134 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 FRS3O43559 492 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 WDR1O75083 606 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 UBOX5O94941 541 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 NTN1O95631 604 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 GABRA1P14867 456 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 ZNF708P17019 499 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 ACAA2P42765 397 aaKnown RBP17.33■□□□□ 0.36
HOXA9-202ENST00000396345 CLDN18P56856 261 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 GLIPR1L2Q4G1C9 344 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 RINLQ6ZS11 566 aa17.33■□□□□ 0.36
HOXA9-202ENST00000396345 FJX1Q86VR8 437 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms