RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TESQ9UGI8 421 aaKnown RBP12.8□□□□□ -0.36
VPS25-201ENST00000253794 SLC7A8Q9UHI5 535 aa12.8□□□□□ -0.36
VPS25-201ENST00000253794 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 CELA3AP09093 270 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 PRKCAP17252 672 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 ATP6V1B2P21281 511 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 EIF1P41567 113 aaKnown RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 ZNF41P51814 821 aaPredicted RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 GFRA1P56159 465 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 TRILQ7L0X0 811 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 DHFR2Q86XF0 187 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 TMCO5AQ8N6Q1 288 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 PHF10Q8WUB8 498 aaKnown RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 PROX1Q92786 737 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 MRGPRX4Q96LA9 322 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 WFDC6Q9BQY6 131 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 POLR2J2Q9GZM3 115 aaKnown RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 POLR2J3Q9H1A7 115 aaKnown RBP12.79□□□□□ -0.36
VPS25-201ENST00000253794 ACER3Q9NUN7 267 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 TAS2R10Q9NYW0 307 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 DKKL1Q9UK85 242 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 SLC13A4Q9UKG4 626 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 POMPQ9Y244 141 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
VPS25-201ENST00000253794 TCRBV5S2A0A599 114 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 AQP12BA6NM10 295 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 AP3D1O14617 1153 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 TPST2O60704 377 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 C1QL1O75973 258 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 SEMG1P04279 462 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 PRG2P13727 222 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 EDN3P14138 238 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 HK1P19367 917 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 CHMP24386 653 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 ELK4P28324 431 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 SLC1A3P43003 542 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 KCNC4Q03721 635 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 QPRTQ15274 297 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 TOMM34Q15785 309 aaPredicted RBP12.78□□□□□ -0.36
VPS25-201ENST00000253794 NPTX1Q15818 432 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 CHERPQ8IWX8 916 aaKnown RBP12.78□□□□□ -0.36
VPS25-201ENST00000253794 AQP12AQ8IXF9 295 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 ZNF843Q8N446 348 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 OR6T1Q8NGN1 323 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 NEIL3Q8TAT5 605 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 POC1BQ8TC44 478 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 CPT1CQ8TCG5 803 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
VPS25-201ENST00000253794 TMEM234Q8WY98 164 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 CCDC124Q96CT7 223 aaKnown RBP12.78□□□□□ -0.36
VPS25-201ENST00000253794 HSH2DQ96JZ2 352 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 ZNF559Q9BR84 538 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 PIGQQ9BRB3 760 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 TRIM2Q9C040 744 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 ADAM19Q9H013 955 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 C12orf10Q9HB07 376 aa12.78□□□□□ -0.36
VPS25-201ENST00000253794 OR2M5A3KFT3 312 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 OR14I1A6ND48 311 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 B8ZZF3 427 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 FAM47E-STBD1D6RA91 191 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 NPIPA5E9PKD4 350 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 AQP7O14520 342 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 FRS3O43559 492 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 CDC40O60508 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS25-201ENST00000253794 CYP7B1O75881 506 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 WISP2O76076 250 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 ACTL6AO96019 429 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 GKN3PP0CG01 181 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 HTR2AP28223 471 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 HTR3AP46098 478 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 CCR4P51679 360 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 MAP2K6P52564 334 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 SESN3P58005 492 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 IFI44LQ53G44 452 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 COLEC12Q5KU26 742 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 VASNQ6EMK4 673 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 WBP2NLQ6ICG8 309 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 ARHGAP11AQ6P4F7 1023 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 GRINAQ7Z429 371 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 VTCN1Q7Z7D3 282 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
VPS25-201ENST00000253794 RANBP3LQ86VV4 465 aaPredicted RBP12.77□□□□□ -0.37
VPS25-201ENST00000253794 CARM1Q86X55 608 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 LACC1Q8IV20 430 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 GHDCQ8N2G8 530 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 OR14L1PQ8NHC6 308 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 PYURFQ96I23 114 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 TRIM15Q9C019 465 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 DEFB127Q9H1M4 99 aa12.77□□□□□ -0.37
VPS25-201ENST00000253794 NPIPA1Q9UND3 350 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms