RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 WWTR1Q9GZV5 400 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 PAIP1Q9H074 479 aaKnown RBP9.24□□□□□ -0.93
SDF2-209ENST00000591903 CXorf36Q9H7Y0 433 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 EFCAB1Q9HAE3 211 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 HHATLQ9HCP6 504 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 ZCCHC3Q9NUD5 404 aaKnown RBP9.24□□□□□ -0.93
SDF2-209ENST00000591903 GID8Q9NWU2 228 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 NDE1Q9NXR1 346 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 CDC42EP3Q9UKI2 254 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 CNOT11Q9UKZ1 510 aaKnown RBP9.24□□□□□ -0.93
SDF2-209ENST00000591903 EXPH5Q8NEV8 1989 aa9.24□□□□□ -0.93
SDF2-209ENST00000591903 NUP214P35658 2090 aaPredicted RBP9.24□□□□□ -0.93
SDF2-209ENST00000591903 RNF103-CHMP3A0A140T963 221 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 C2orf92A0A1B0GVN3 265 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 A8MV72 311 aaPredicted RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 HNRNPCL1O60812 293 aaKnown RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 NKX2-2O95096 273 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ANP32DO95626 131 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 FBXO45P0C2W1 286 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 BMP2P12643 396 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 COX4I1P13073 169 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 CPN1P15169 458 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 CHMP24386 653 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 SSTR4P31391 388 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 THBS2P35442 1172 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 PSMD4P55036 377 aaKnown RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 NRG3P56975 720 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 MRPS22P82650 360 aaKnown RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 MRPS35P82673 323 aaKnown RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 PSG6Q00889 435 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 NTRK2Q16620 822 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 CLEC12BQ2HXU8 276 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 MMEL1Q495T6 779 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 SPATS1Q496A3 300 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 HLA-DQA1Q5Y7H0 255 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 MFSD12Q6NUT3 480 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 FAM111BQ6SJ93 734 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 LYPD8Q6UX82 237 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 DLEU7Q6UYE1 221 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 TRPM8Q7Z2W7 1104 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 C9orf40Q8IXQ3 194 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 CLECL1Q8IZS7 167 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 TAGAPQ8N103 731 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 METTL25Q8N6Q8 603 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ADCY4Q8NFM4 1077 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 OR10G3Q8NGC4 313 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 OR52R1Q8NGF1 315 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 OR8J3Q8NGG0 315 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ZFP90Q8TF47 636 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 VPS33AQ96AX1 596 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 LCORQ96JN0 433 aaPredicted RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 HOPXQ9BPY8 73 aaPredicted RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 SLC35A5Q9BS91 424 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ACTRT3Q9BYD9 372 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 REG4Q9BYZ8 158 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 UBQLN3Q9H347 655 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 PIGUQ9H490 435 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 POLE3Q9NRF9 147 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 GPATCH2Q9NW75 528 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 KLHL28Q9NXS3 571 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ARMCX1Q9P291 453 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 MRTO4Q9UKD2 239 aaKnown RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 FAF1Q9UNN5 650 aaPredicted RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 GPR55Q9Y2T6 319 aaPredicted RBP9.23□□□□□ -0.93
SDF2-209ENST00000591903 SLC6A5Q9Y345 797 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 ROS1P08922 2347 aa9.23□□□□□ -0.93
SDF2-209ENST00000591903 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.939e-12■■■■□ 24.7
SDF2-209ENST00000591903 TP53I11O14683 189 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 MRASO14807 208 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 DNAJA2O60884 412 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 HMGN2P05204 90 aaKnown RBP9.22□□□□□ -0.93
SDF2-209ENST00000591903 CRHP06850 196 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 CT45A8P0DMV1 189 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 CT45A9P0DMV2 189 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 GPX2P18283 190 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 CALB2P22676 271 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 CD79BP40259 229 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 MASP1P48740 699 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 RPP38P78345 283 aaKnown RBP9.22□□□□□ -0.93
SDF2-209ENST00000591903 SPDYE7PQ495Y7 208 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 CT45A2Q5DJT8 189 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 C6orf10Q5SRN2 563 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 PRAMEF8Q5VWM4 474 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 PRAMEF7Q5VXH5 474 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 REP15Q6BDI9 236 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 FAM180BQ6P0A1 224 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 ZNF621Q6ZSS3 439 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 C6orf120Q7Z4R8 191 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 DHDDSQ86SQ9 333 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 ANKRD46Q86W74 232 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 SNX32Q86XE0 403 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 FITM2Q8N6M3 262 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 MAPK1IP1LQ8NDC0 245 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 DIO2Q92813 273 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 KAT2AQ92830 837 aa9.22□□□□□ -0.93
SDF2-209ENST00000591903 INTS12Q96CB8 462 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms