RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CADM3Q8N126 398 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TOR1AIP2Q8NFQ8 470 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 OR8J1Q8NGP2 316 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 GRHL3Q8TE85 626 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CHPT1Q8WUD6 406 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CAPSLQ8WWF8 208 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TRUB1Q8WWH5 349 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 GTPBP2Q9BX10 602 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC7A5P2Q9GIP4 190 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 POLR2J2Q9GZM3 115 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 NXF5Q9H1B4 397 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC25A19Q9HC21 320 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 C20orf141Q9NUB4 165 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ZDBF2Q9HCK1 2354 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TRIM64BA6NI03 449 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SULT1C4O75897 302 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC15A1P46059 708 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SMSP52788 366 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 EFNB1P98172 346 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ACY1Q03154 408 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 FGFBP1Q14512 234 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM201Q5SNT2 666 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 PWWP2BQ6NUJ5 590 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 LANCL3Q6ZV70 420 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 STX19Q8N4C7 294 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CEP76Q8TAP6 659 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TEX47Q8TBZ9 253 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM239Q8WW34 195 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 NAT6Q93015 286 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC46A1Q96NT5 459 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF559Q9BR84 538 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 NUDT9Q9BW91 350 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 MKKSQ9NPJ1 570 aaPredicted RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TAS2R16Q9NYV7 291 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 IL20RAQ9UHF4 553 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF223Q9UK11 482 aaPredicted RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 FBXO4Q9UKT5 387 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SRPK3Q9UPE1 567 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 WDR87Q6ZQQ6 2873 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 KPNA4O00629 521 aaPredicted RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 DYRK3O43781 588 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CER1O95813 267 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 BCL10O95999 233 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CKMT1AP12532 417 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 FUT1P19526 365 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 RORAP35398 523 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 STAT5AP42229 794 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 PPICP45877 212 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 UBE2UQ5VVX9 321 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 FAAH2Q6GMR7 532 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC27A4Q6P1M0 643 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC23A3Q6PIS1 610 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 RAB2BQ8WUD1 216 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 FGF11Q92914 225 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ADIPOR1Q96A54 375 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 MESP1Q9BRJ9 268 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 POLDIP3Q9BY77 421 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ERGIC3Q9Y282 383 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ADAMTS20P59510 1910 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 A0A0B4J2E0 115 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.66□□□□□ -1.02
LINC00838-201ENST00000562956 A0A1B0GWA3 101 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 A0A1B0GX12 115 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 MAKP20794 623 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 IDUAP35475 653 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 NFATC3Q12968 1075 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 TBCEQ15813 527 aaPredicted RBP8.66□□□□□ -1.02
LINC00838-201ENST00000562956 SNAPC1Q16533 368 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF613Q6PF04 617 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF620Q6ZNG0 422 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
LINC00838-201ENST00000562956 RABEPKQ7Z6M1 372 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 ANKRD13BQ86YJ7 626 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 C9orf40Q8IXQ3 194 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 FAM26EQ8N5C1 309 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 YIPF6Q96EC8 236 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 GAL3ST4Q96RP7 486 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 DPH1Q9BZG8 443 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 NRSN2Q9GZP1 204 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM27Q9HBJ8 222 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 APMAPQ9HDC9 416 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 C14orf105Q9NVL8 296 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 IL20Q9NYY1 176 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 CNOT2Q9NZN8 540 aaKnown RBP8.66□□□□□ -1.02
LINC00838-201ENST00000562956 ENPP5Q9UJA9 477 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 GPR52Q9Y2T5 361 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 WDFY3Q8IZQ1 3526 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 CDC14CA4D256 554 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 EFCAB10A6NFE3 127 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 SERINC4A6NH21 518 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 POLR1CO15160 346 aaPredicted RBP8.66□□□□□ -1.02
LINC00838-201ENST00000562956 GDF9O60383 454 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 RFPL3O75679 317 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 SCRG1O75711 98 aa8.66□□□□□ -1.02
LINC00838-201ENST00000562956 CSTAP01040 98 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms