RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 BBS10Q8TAM1 723 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 GPR119Q8TDV5 335 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 SMPDL3BQ92485 455 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 CCDC120Q96HB5 630 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 LAT2Q9GZY6 243 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 TMEM38AQ9H6F2 299 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 KAT8Q9H7Z6 458 aaKnown RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 ARL8BQ9NVJ2 186 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 THUMPD1Q9NXG2 353 aaKnown RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 SLC5A6Q9Y289 635 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 ZNF443Q9Y2A4 671 aaPredicted RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 MEMO1Q9Y316 297 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 MRPS18CQ9Y3D5 142 aaKnown RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 ZNF337Q9Y3M9 751 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 CHST2Q9Y4C5 530 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 FAM215AQ9Y5M1 114 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 CACNA1CQ13936 2221 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 RELNP78509 3460 aa11.6□□□□□ -0.55
VEGFA-224ENST00000523873 INTS1Q8N201 2190 aaKnown RBP11.6□□□□□ -0.55
VEGFA-224ENST00000523873 A0A1B0GUH1 482 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 CCT8L1PA6NM43 557 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 FAM47E-STBD1D6RA91 191 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 H0YC42 278 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 AP3D1O14617 1153 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 SEC14L5O43304 696 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 EIF4E2O60573 245 aaKnown RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ZG16O60844 167 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ACTL6AO96019 429 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 LINGO3P0C6S8 592 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 PABPC4LP0CB38 370 aaKnown RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ESRRAP11474 423 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 NID1P14543 1247 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 PRKCAP17252 672 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 SLC6A2P23975 617 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 GCKP35557 465 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ADH7P40394 386 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 LHX2P50458 406 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 NUDT2P50583 147 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 SUCLG1P53597 346 aaKnown RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 TPD52P55327 224 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 CLDN18P56856 261 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 EEF1A1P68104 462 aaKnown RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ADORA2A-AS1P86434 159 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 GNA13Q14344 377 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 QPRTQ15274 297 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 TMEM44Q2T9K0 475 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.59□□□□□ -0.552e-13■□□□□ 10.4
VEGFA-224ENST00000523873 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 C1orf185Q5T7R7 199 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 GKAP1Q5VSY0 366 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 REEP3Q6NUK4 255 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 NET1Q7Z628 596 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 COMTD1Q86VU5 262 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 ULK2Q8IYT8 1036 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 CCDC197Q8NCU1 140 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 TOR1AIP2Q8NFQ8 470 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 OR8J3Q8NGG0 315 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 FBXO27Q8NI29 283 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 LRRC37BQ96QE4 947 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 DMRTA2Q96SC8 542 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 PRDM14Q9GZV8 571 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 TP63Q9H3D4 680 aaPredicted RBP11.59□□□□□ -0.55
VEGFA-224ENST00000523873 TMEM185BQ9H7F4 350 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 BCL2L10Q9HD36 194 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 CMTM6Q9NX76 183 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 SLC35A3Q9Y2D2 325 aa11.59□□□□□ -0.55
VEGFA-224ENST00000523873 A0A087WZY1 265 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 H0Y3Z8 333 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 FRS3O43559 492 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 EFNA2O43921 213 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 GCM2O75603 506 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-224ENST00000523873 DCTN3O75935 186 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 LDLRP01130 860 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 OPN1SWP03999 348 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 GKN3PP0CG01 181 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 PEPDP12955 493 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 ZNF708P17019 499 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-224ENST00000523873 CHMP24386 653 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 PSMA4P25789 261 aaKnown RBP11.58□□□□□ -0.56
VEGFA-224ENST00000523873 ACVR2AP27037 513 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 SHC1P29353 583 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 PRDX6P30041 224 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 SUMO3P55854 103 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-224ENST00000523873 CLDN15P56746 228 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 CLDN20P56880 219 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 NUP107P57740 925 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 CBFBQ13951 182 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 GLYR1Q49A26 553 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-224ENST00000523873 GLIPR1L2Q4G1C9 344 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 ZNF311Q5JNZ3 666 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 PRAMEF8Q5VWM4 474 aa11.58□□□□□ -0.56
VEGFA-224ENST00000523873 PRAMEF7Q5VXH5 474 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms