RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SOHLH2Q9NX45 425 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 PLEK2Q9NYT0 353 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 TAS2R7Q9NYW3 318 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 STMN3Q9NZ72 180 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 THAP10Q9P2Z0 257 aaPredicted RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 HMGXB4Q9UGU5 601 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 PILRAQ9UKJ1 303 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 NUP50Q9UKX7 468 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 MRPS18CQ9Y3D5 142 aaKnown RBP3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 AP4S1Q9Y587 144 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 MAD1L1Q9Y6D9 718 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 MYH8P13535 1937 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF609O15014 1411 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 ADAMTS13Q76LX8 1427 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM205AQ6ZU69 1335 aa3.18□□□□□ -1.9
ECHDC1-217ENST00000488087 A0A1B0GUL6 1792 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TDRD15B5MCY1 1934 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SYNJ2BP-COX16A0A087WUM0 186 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 IGKV3D-20A0A0C4DH25 116 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RNF103-CHMP3A0A140T963 221 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 LINC00854A0A1B0GVQ3 168 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ATP6AP2A0A1C7CYW4 349 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ISPDA4D126 451 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 LRRIQ4A6NIV6 560 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC9B1P1A6NJY1 282 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 H3BSA7 217 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC28A1O00337 649 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC9A3R1O14745 358 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 P2RX6O15547 441 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 PSMD3O43242 534 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF749O43361 778 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 PI15O43692 258 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 GMNNO75496 209 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TRIM16O95361 564 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 PLEKHA8P1O95397 391 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TGFAP01135 160 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CT45A8P0DMV1 189 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CT45A9P0DMV2 189 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SFTPCP11686 197 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ODC1P11926 461 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CD1DP15813 335 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SELEP16581 610 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CCNE1P24864 410 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 DCKP27707 260 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 NMT1P30419 496 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RRM2P31350 389 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FCGR2BP31994 310 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FCGR2CP31995 323 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TNFSF10P50591 281 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 HADHBP55084 474 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 STX17P56962 302 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ABCE1P61221 599 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ESRRGP62508 458 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MYBPC1Q00872 1141 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 GFPT1Q06210 699 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 LRRC74AQ0VAA2 488 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SELENBP1Q13228 472 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 PDE7AQ13946 482 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF846Q147U1 533 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MEF2DQ14814 521 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF146Q15072 292 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MLF2Q15773 248 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MAPK6Q16659 721 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TRIM16LQ309B1 348 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CCDC58Q4VC31 144 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CEP55Q53EZ4 464 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CAVIN4Q5BKX8 364 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CT45A2Q5DJT8 189 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 C1orf189Q5VU69 101 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ZFP1Q6P2D0 407 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 LPCAT2Q7L5N7 544 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 HDDC2Q7Z4H3 204 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 C17orf64Q86WR6 236 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RNF130Q86XS8 419 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC38A6Q8IZM9 456 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 NATD1Q8N6N6 113 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 METTL13Q8N6R0 699 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TRPV3Q8NET8 790 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 LHFPL5Q8TAF8 219 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FBXO30Q8TB52 745 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 GPR148Q8TDV2 347 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM46BQ96A09 425 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CIDECQ96AQ7 238 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TAMM41Q96BW9 452 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM111AQ96PZ2 611 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 VPS35Q96QK1 796 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SECISBP2Q96T21 854 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 BCL7BQ9BQE9 202 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CCDC77Q9BR77 488 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 C1orf50Q9BV19 199 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 NUSAP1Q9BXS6 441 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 YTHDF1Q9BYJ9 559 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CCSER1Q9C0I3 900 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 FNDC4Q9H6D8 234 aaPredicted RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF665Q9H7R5 613 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SP140LQ9H930 580 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms