RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 LCTLQ6UWM7 567 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 BMP8AQ7Z5Y6 402 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SFTPA1Q8IWL2 248 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 ARRDC3Q96B67 414 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 DERL3Q96Q80 235 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 PINK1Q9BXM7 581 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 SEMA4CQ9C0C4 833 aa11.85□□□□□ -0.51
VPS52-218ENST00000482399 GRXCR1A8MXD5 290 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 RAD1O60671 282 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 HIST1H1TP22492 207 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 GDNFP39905 211 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 TIGD3Q6B0B8 471 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 OR2L2Q8NH16 312 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 MOSPD2Q8NHP6 518 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 LGALS14Q8TCE9 139 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 SMPDL3BQ92485 455 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 NKX3-1Q99801 234 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 FGF20Q9NP95 211 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 LDB3O75112 727 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 KLHL18O94889 574 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 SGCGQ13326 291 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 DHCR24Q15392 516 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 ST3GAL2Q16842 350 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 PUS10Q3MIT2 529 aaKnown RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 NR2C2APQ86WQ0 139 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 ACOT12Q8WYK0 555 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 NXPE3Q969Y0 559 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 PPP1R16AQ96I34 528 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
VPS52-218ENST00000482399 NT5DC2Q9H857 520 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 SYNPO2LQ9H987 977 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 PRDM9Q9NQV7 894 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 C20orf141Q9NUB4 165 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 TAS2R10Q9NYW0 307 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 RPS6KB2Q9UBS0 482 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
VPS52-218ENST00000482399 SERTM1A2A2V5 107 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TRABD2BA6NFA1 517 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 CFDP00746 253 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 CST5P28325 142 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 SLC6A1P30531 599 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 HTR1FP30939 366 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 STAT5AP42229 794 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 CSNK1G2P78368 415 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 FGL2Q14314 439 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ZNF782Q6ZMW2 699 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 RTL4Q6ZR62 310 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 MEPCEQ7L2J0 689 aaKnown RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 UBE2Q1Q7Z7E8 422 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 GALNT6Q8NCL4 622 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LSM14AQ8ND56 463 aaKnown RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 OR5J2Q8NH18 312 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 THAP4Q8WY91 577 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 PTCHD1Q96NR3 888 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 SIDT1Q9NXL6 827 aaKnown RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 FNDC1Q4ZHG4 1894 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 A0A1W2PPL8 197 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 HIDE1A8MVS5 230 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TRIM3O75382 744 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 CDC123O75794 336 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 HPXP02790 462 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ADH5P11766 374 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ZNF3P17036 446 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LAG3P18627 525 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ACADLP28330 430 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TCTE1Q5JU00 501 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ZNF620Q6ZNG0 422 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 CFAP77Q6ZQR2 320 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 TMED4Q7Z7H5 227 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 PARGQ86W56 976 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LCN9Q8WX39 176 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LMLNQ96KR4 655 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 MED18Q9BUE0 208 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 SLC38A1Q9H2H9 487 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ATP6V1G2-DDX39BF2Z307 99 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 GPR171O14626 319 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 SIGLEC5O15389 551 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 SPDEFO95238 335 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ANXA7P20073 488 aaKnown RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 BCL6P41182 706 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 LIMK1P53667 647 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 SIGLEC14Q08ET2 396 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 ZNF155Q12901 538 aaPredicted RBP11.83□□□□□ -0.52
VPS52-218ENST00000482399 TNK1Q13470 666 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 HSD17B12Q53GQ0 312 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 FAM111BQ6SJ93 734 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 FCRLAQ7L513 359 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 GID4Q8IVV7 300 aa11.83□□□□□ -0.52
VPS52-218ENST00000482399 GATSQ8NAP1 163 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms