RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 GCM2O75603 506 aaPredicted RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 PRKD3O94806 890 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 KRT16P08779 473 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 CCT3P49368 545 aaKnown RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 TMEM176BQ3YBM2 270 aaPredicted RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 SFRP5Q5T4F7 317 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 ALKBH2Q6NS38 261 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 TFAP2EQ6VUC0 442 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 NUFIP2Q7Z417 695 aaKnown RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 TUSC5Q8IXB3 177 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 NATD1Q8N6N6 113 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 OR56A1Q8NGH5 318 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 PSMA8Q8TAA3 256 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 RAB3IL1Q8TBN0 382 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 EPS8L3Q8TE67 593 aaKnown RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 OR5P2Q8WZ92 322 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 HSD17B8Q92506 261 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 EML4Q9HC35 981 aaKnown RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 FAF1Q9UNN5 650 aaPredicted RBP20.27■□□□□ 0.84
USP42-205ENST00000465073 CARD8Q9Y2G2 431 aa20.27■□□□□ 0.84
USP42-205ENST00000465073 INAFM1C9JVW0 142 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 GTPBP1O00178 669 aaKnown RBP20.26■□□□□ 0.83
USP42-205ENST00000465073 PIP5K1BO14986 540 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 NPHS1O60500 1241 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 CHRNGP07510 517 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 YES1P07947 543 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 LAMP1P11279 417 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 IL32P24001 234 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 RPS4XP62701 263 aaKnown RBP20.26■□□□□ 0.83
USP42-205ENST00000465073 P2RY6Q15077 328 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 ARL13AQ5H913 290 aaPredicted RBP20.26■□□□□ 0.83
USP42-205ENST00000465073 CBLN3Q6UW01 205 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 FCRLAQ7L513 359 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 SLC43A2Q8N370 569 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 ADAMTS15Q8TE58 950 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 ATAD3AQ9NVI7 634 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 LAMP3Q9UQV4 416 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 RNF115Q9Y4L5 304 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 PRR14LQ5THK1 2151 aa20.26■□□□□ 0.83
USP42-205ENST00000465073 KIAA1324LA8MWY0 1029 aaPredicted RBP20.25■□□□□ 0.83
USP42-205ENST00000465073 TMEM233B4DJY2 109 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 OIP5O43482 229 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 ATP12AP54707 1039 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 CAPRIN1Q14444 709 aaKnown RBP20.25■□□□□ 0.83
USP42-205ENST00000465073 LSM12Q3MHD2 195 aaKnown RBP20.25■□□□□ 0.83
USP42-205ENST00000465073 DCST2Q5T1A1 773 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 NCMAPQ5T1S8 102 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 GPR119Q8TDV5 335 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 MRGPRX4Q96LA9 322 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 ESRP2Q9H6T0 727 aaKnown RBP20.25■□□□□ 0.83
USP42-205ENST00000465073 MKS1Q9NXB0 559 aa20.25■□□□□ 0.83
USP42-205ENST00000465073 NPIPA5A0A0B4J1W7 369 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 NPIPA7E9PJI5 369 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 PEX11AO75192 247 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 LYPLA1O75608 230 aaPredicted RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 CD3EP07766 207 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 NPIPA8P0DM63 369 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 ALDH3A1P30838 453 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TNK1Q13470 666 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TP53BP2Q13625 1128 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TAB1Q15750 504 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 SPDYE7PQ495Y7 208 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.24■□□□□ 0.83
USP42-205ENST00000465073 LILRB1Q8NHL6 650 aaPredicted RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 ZFP90Q8TF47 636 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 KISS1RQ969F8 398 aaPredicted RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 MOAP1Q96BY2 351 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TRMT61AQ96FX7 289 aaKnown RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 PRPF18Q99633 342 aaKnown RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 GPATCH2Q9NW75 528 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 DTNAQ9Y4J8 743 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 KCNE3Q9Y6H6 103 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 NPIPB9F8W1W9 429 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 OVOL3O00110 214 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 NTN1O95631 604 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 ADAP00813 363 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 PRKCAP17252 672 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TSC22D1Q15714 1073 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 TOMM34Q15785 309 aaPredicted RBP20.24■□□□□ 0.83
USP42-205ENST00000465073 ETFDHQ16134 617 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 ATP6AP1LQ52LC2 224 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 XKR7Q5GH72 579 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 ATP6V1C2Q8NEY4 427 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 SFXN5Q8TD22 340 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 FBXW5Q969U6 566 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 COQ8BQ96D53 544 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 APOPT1Q96IL0 206 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 MDFIQ99750 246 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 CXorf36Q9H7Y0 433 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 COQ10BQ9H8M1 238 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 GIMAP2Q9UG22 337 aa20.24■□□□□ 0.83
USP42-205ENST00000465073 CLOCKO15516 846 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 SLC7A1P30825 629 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 RNF144AP50876 292 aaPredicted RBP20.23■□□□□ 0.83
USP42-205ENST00000465073 RAC3P60763 192 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 SELENBP1Q13228 472 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 ITGADQ13349 1161 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 SLC25A53Q5H9E4 307 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 BANPQ8N9N5 519 aa20.23■□□□□ 0.83
USP42-205ENST00000465073 OR5W2Q8NH69 310 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms