RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 RBP1P09455 135 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 TACSTD2P09758 323 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ENPP1P22413 925 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 GIFP27352 417 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 TYK2P29597 1187 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 KRT6CP48668 564 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 CHRNEQ04844 493 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 TMEM107Q6UX40 140 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 PTGR2Q8N8N7 351 aaPredicted RBP13.16□□□□□ -0.3
NELFE-204ENST00000436289 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 GPR151Q8TDV0 419 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ELP4Q96EB1 424 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 IQCGQ9H095 443 aaKnown RBP13.16□□□□□ -0.3
NELFE-204ENST00000436289 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 TAS2R16Q9NYV7 291 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 EMC3Q9P0I2 261 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
NELFE-204ENST00000436289 WBP11Q9Y2W2 641 aaKnown RBP13.16□□□□□ -0.3
NELFE-204ENST00000436289 PCDHB14Q9Y5E9 798 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SCDO00767 359 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 RAD51DO75771 328 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 JUNP05412 331 aaKnown RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 ERCC1P07992 297 aaPredicted RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 DDCP20711 480 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SLC7A1P30825 629 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 CDH15P55291 814 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SUMO3P55854 103 aaPredicted RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 DEFA6Q01524 100 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 LGALS3BPQ08380 585 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SPOCK1Q08629 439 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 ACSM2AQ08AH3 577 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 PDK3Q15120 406 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 ACSM2BQ68CK6 577 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 UBE2J2Q8N2K1 259 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 CEP70Q8NHQ1 597 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 C16orf78Q8WTQ4 265 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 HOXB13Q92826 284 aaPredicted RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 PHF21BQ96EK2 531 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 GPR78Q96P69 363 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 METTL17Q9H7H0 456 aaPredicted RBP13.15□□□□□ -0.3
NELFE-204ENST00000436289 ASB6Q9NWX5 421 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 ZNF281Q9Y2X9 895 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 ACTL7BQ9Y614 415 aa13.15□□□□□ -0.3
NELFE-204ENST00000436289 A0A096LPK6 155 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SMIM24O75264 130 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 ULK1O75385 1050 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 NKX2-2O95096 273 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 IGKV1D-16P01601 117 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 PRPS2P11908 318 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 PAX7P23759 505 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
NELFE-204ENST00000436289 SHC1P29353 583 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 NTSP30990 170 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SERPINB4P48594 390 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 C17orf78Q8N4C9 275 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 CDRT4Q8N9R6 151 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 TOR1AIP2Q8NFQ8 470 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 ZNF75CPQ92670 426 aaPredicted RBP13.14□□□□□ -0.31
NELFE-204ENST00000436289 FBXO17Q96EF6 278 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SH3YL1Q96HL8 342 aaPredicted RBP13.14□□□□□ -0.31
NELFE-204ENST00000436289 MRGPRX4Q96LA9 322 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 VRK1Q99986 396 aaPredicted RBP13.14□□□□□ -0.31
NELFE-204ENST00000436289 SOX7Q9BT81 388 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
NELFE-204ENST00000436289 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 LRP5LA4QPB2 252 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 B4DSR2 109 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 B9A039 149 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 EFNA2O43921 213 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 STAMBPO95630 424 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 STX2P32856 288 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 SERPINF1P36955 418 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 MAP3K8P41279 467 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 HILS1P60008 231 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 FOXF1Q12946 379 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 SELENBP1Q13228 472 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 MLC1Q15049 377 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
NELFE-204ENST00000436289 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 LRRC17Q8N6Y2 441 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 FBXO27Q8NI29 283 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
NELFE-204ENST00000436289 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
NELFE-204ENST00000436289 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms