RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PEX5LQ8IYB4 626 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 METTL25Q8N6Q8 603 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 TMEM234Q8WY98 164 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 MRGPRX4Q96LA9 322 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 TUBA1CQ9BQE3 449 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 SLC24A3Q9HC58 644 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
CHTOP-202ENST00000368687 SLC6A13Q9NSD5 602 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 Q9UFV3 132 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 NDUFAF1Q9Y375 327 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 ZNF337Q9Y3M9 751 aa16.72■□□□□ 0.27
CHTOP-202ENST00000368687 HEATR5AQ86XA9 2040 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 AGAP5A6NIR3 686 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 CLCA1A8K7I4 914 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 EVPLLA8MZ36 301 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 HNRNPRO43390 633 aaKnown RBP16.71■□□□□ 0.27
CHTOP-202ENST00000368687 GMFGO60234 142 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 DNAJA2O60884 412 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 IL18BPO95998 194 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 DBIP07108 87 aaKnown RBP16.71■□□□□ 0.27
CHTOP-202ENST00000368687 LINGO3P0C6S8 592 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 BMP2P12643 396 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 PGCP20142 388 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 CAPN3P20807 821 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 TCEA1P23193 301 aaKnown RBP16.71■□□□□ 0.27
CHTOP-202ENST00000368687 ADSLP30566 484 aaPredicted RBP16.71■□□□□ 0.27
CHTOP-202ENST00000368687 OPRM1P35372 400 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 PEX19P40855 299 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 STARP49675 285 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 MVDP53602 400 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 RAC1P63000 192 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 SKP2Q13309 424 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 RGNQ15493 299 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 MAPRE2Q15555 327 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 PDSS1Q5T2R2 415 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 OR2A2Q6IF42 318 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 GRAMD2AQ8IUY3 354 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 FAM71CQ8NEG0 241 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 ST8SIA1Q92185 356 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 SLC38A1Q9H2H9 487 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 ARMC7Q9H6L4 198 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 SLC52A3Q9NQ40 469 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 ZNF175Q9Y473 711 aa16.71■□□□□ 0.27
CHTOP-202ENST00000368687 INTS1Q8N201 2190 aaKnown RBP16.7■□□□□ 0.26
CHTOP-202ENST00000368687 ETV2O00321 342 aaPredicted RBP16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CRHP06850 196 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CHRM4P08173 479 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 SNRPB2P08579 225 aaKnown RBP16.7■□□□□ 0.26
CHTOP-202ENST00000368687 ETFAP13804 333 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 UQCRBP14927 111 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 HOXB9P17482 250 aaPredicted RBP16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CCR4P51679 360 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 KCNJ10P78508 379 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CHRNEQ04844 493 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 SYPL1Q16563 259 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CBLN3Q6UW01 205 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 ESPNLQ6ZVH7 1005 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 SEM1Q6ZVN7 128 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CCDC71Q8IV32 467 aaPredicted RBP16.7■□□□□ 0.26
CHTOP-202ENST00000368687 UBQLNLQ8IYU4 475 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 DPP10Q8N608 796 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 ANKFN1Q8N957 763 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 GPR119Q8TDV5 335 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 RNF145Q96MT1 663 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 SFXN3Q9BWM7 321 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 A4GALTQ9NPC4 353 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 CLCF1Q9UBD9 225 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 KCNE5Q9UJ90 142 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 DSPPQ9NZW4 1301 aa16.7■□□□□ 0.26
CHTOP-202ENST00000368687 ITPR2Q14571 2701 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 A0A0G2JPF8 293 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 PRAMEF27A3QJZ7 478 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SLC22A20A6NK97 555 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 HNRNPCL2B2RXH8 293 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 HNRNPCL3B7ZW38 293 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SLC22A2O15244 555 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SEC14L5O43304 696 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 RCBTB2O95199 551 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 TFPTP0C1Z6 253 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 UBTFL6P0CB48 400 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 HNRNPCL4P0DMR1 293 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 NID1P14543 1247 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 IL7RP16871 459 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 RPS4Y1P22090 263 aaKnown RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 CTSSP25774 331 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 PSMA4P25789 261 aaKnown RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 FKBP2P26885 142 aaKnown RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 PGM1P36871 562 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SELENBP1Q13228 472 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 LARS2Q15031 903 aaKnown RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 GTDC1Q4AE62 458 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 LIN52Q52LA3 116 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SLC25A53Q5H9E4 307 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 COQ5Q5HYK3 327 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 SP5Q6BEB4 398 aaPredicted RBP16.69■□□□□ 0.26
CHTOP-202ENST00000368687 P4HA3Q7Z4N8 544 aa16.69■□□□□ 0.26
CHTOP-202ENST00000368687 ZNF440Q8IYI8 595 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms