RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 M0R082 166 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CCRL2O00421 344 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 AIREO43918 545 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 PPM1BO75688 479 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 RAB36O95755 333 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ONECUT2O95948 504 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 THY1P04216 161 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 LCKP06239 509 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ADORA3P0DMS8 318 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 DBTP11182 482 aaKnown RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 CDK4P11802 303 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 MYL12AP19105 171 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 MAOAP21397 527 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 HTR2AP28223 471 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SLC9A3P48764 834 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CLK1P49759 484 aaKnown RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 SEPHS1P49903 392 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 GPR143P51810 404 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 NUDT6P53370 316 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 RAB15P59190 212 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CFHR1Q03591 330 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF91Q05481 1191 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 DMWDQ09019 674 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ERV3-1Q14264 604 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SYT16Q17RD7 645 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 PLK5Q496M5 336 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 MINDY4Q4G0A6 757 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ARMCX4Q5H9R4 360 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 PDZK1Q5T2W1 519 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 NXNL2Q5VZ03 156 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 RHBDD2Q6NTF9 364 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 BMP8AQ7Z5Y6 402 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 HMGN2P46Q86SG4 172 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 KIF18BQ86Y91 864 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 GID4Q8IVV7 300 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 NLGN4XQ8N0W4 816 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 NANOGP1Q8N7R0 232 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 Q8N9G6 341 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 POGLUT1Q8NBL1 392 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 C17orf47Q8NEP4 570 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ANKK1Q8NFD2 765 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 OR4D9Q8NGE8 314 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 PTPMT1Q8WUK0 201 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 TMEM255BQ8WV15 326 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 FGF11Q92914 225 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CCDC74AQ96AQ1 378 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF501Q96CX3 271 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 LCORQ96JN0 433 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF582Q96NG8 517 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 MGLLQ99685 303 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 GPA33Q99795 319 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF426Q9BUY5 554 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SLC19A3Q9BZV2 496 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SLC24A3Q9HC58 644 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 FBXO34Q9NWN3 711 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SIDT1Q9NXL6 827 aaKnown RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 ZNF223Q9UK11 482 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 EXOSC1Q9Y3B2 195 aaKnown RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 CFAP47Q6ZTR5 3102 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SCN3AQ9NY46 2000 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CHD8Q9HCK8 2581 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 TMEM129A0AVI4 362 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 EFCAB9A8MZ26 197 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 MYL12BO14950 172 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 TO15178 435 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 PRKYO43930 277 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 HCN1O60741 890 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 CDC123O75794 336 aaPredicted RBP9.59□□□□□ -0.87
VPS25-203ENST00000589520 LYPD3O95274 346 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 SCG5P05408 212 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 IGFBP1P08833 259 aaPredicted RBP9.59□□□□□ -0.87
VPS25-203ENST00000589520 GKN3PP0CG01 181 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 IFI30P13284 250 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 FOLR1P15328 257 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 HPGDP15428 266 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 TBXA2RP21731 343 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 TGFBR2P37173 567 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 ACAA2P42765 397 aaKnown RBP9.59□□□□□ -0.87
VPS25-203ENST00000589520 CAPZA2P47755 286 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 RGS6P49758 472 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 PGDP52209 483 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 SLC37A1P57057 533 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 BNC1Q01954 994 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 MLLT11Q13015 90 aaPredicted RBP9.59□□□□□ -0.87
VPS25-203ENST00000589520 SPHARQ15513 63 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 HLA-BQ31612 363 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 PGGHGQ32M88 737 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 ANKDD1AQ495B1 522 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 SYT14P1Q58G82 188 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 ARHGAP40Q5TG30 622 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 HLA-DQA1Q5Y7H0 255 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 C19orf48Q6RUI8 117 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 NPSR1Q6W5P4 371 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 LINC00114Q6XXX2 140 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 RTL4Q6ZR62 310 aa9.59□□□□□ -0.87
VPS25-203ENST00000589520 NUP54Q7Z3B4 507 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms