RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 RAB40BQ12829 278 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 AWAT2Q6E213 333 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 GSG1LQ6UXU4 331 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 TBC1D15Q8TC07 691 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 UBXN10Q96LJ8 280 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 PLEKHA3Q9HB20 300 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 KCNIP2Q9NS61 270 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 IGSF5Q9NSI5 407 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 UCKL1Q9NWZ5 548 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 KAT6AQ92794 2004 aa11.23□□□□□ -0.61
NEK9-210ENST00000557026 AGAP5A6NIR3 686 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 H3BML4 177 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SGK494L7N484 410 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CSF1P09603 554 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 ERVFC1P60507 584 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 AFMIDQ63HM1 303 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SENP5Q96HI0 755 aaPredicted RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 GAL3ST1Q99999 423 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC17A6Q9P2U8 582 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CDHR4A6H8M9 788 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 THBS3P49746 956 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 PITX1P78337 314 aaPredicted RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 SRPXP78539 464 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 ZNF77Q15935 545 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 ZNF181Q2M3W8 571 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC46A3Q7Z3Q1 461 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 TRIM73Q86UV7 250 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 NRMQ8IXM6 262 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 LRR1Q96L50 414 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 UBL7Q96S82 380 aaPredicted RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 EBF2Q9HAK2 575 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 NDRG3Q9UGV2 375 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CKMT2P17540 419 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC6A11P48066 632 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CLDN2P57739 230 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 PM20D2Q8IYS1 436 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 TCEAL4Q96EI5 215 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 OSBPL7Q9BZF2 842 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 C1orf198Q9H425 327 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 FOLH1BQ9HBA9 442 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 KLHL9Q9P2J3 617 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CSN2P05814 226 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SOX2P48431 317 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 ERVPABLB-1P60509 514 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC16A14Q7RTX9 510 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 BOLLQ8N9W6 283 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 NOSIPQ9Y314 301 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 DNAJC15Q9Y5T4 150 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 LCKP06239 509 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 LAMP1P11279 417 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 NELFEP18615 380 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC26A5P58743 744 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SCGB2A2Q13296 93 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 EIF2S3LQ2VIR3 472 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 PAPD4Q6PIY7 484 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 ZNF517Q6ZMY9 492 aaPredicted RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 CAMKMTQ7Z624 323 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CORO2AQ92828 525 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 LRFN5Q96NI6 719 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CCDC106Q9BWC9 280 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 CNOT2Q9NZN8 540 aaKnown RBP11.22□□□□□ -0.61
NEK9-210ENST00000557026 STEAP1Q9UHE8 339 aa11.22□□□□□ -0.61
NEK9-210ENST00000557026 A0A087WZY1 265 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 CLCA1A8K7I4 914 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 SERPINE2P07093 398 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 KCNAB2Q13303 367 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 APOFQ13790 326 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 OR7A5Q15622 319 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 DEFB110Q30KQ9 67 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 PRSS48Q7RTY5 328 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 CADM4Q8NFZ8 388 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 OR51D1Q8NGF3 324 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 ZNF480Q8WV37 535 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 ADAMTS14Q8WXS8 1223 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.61
NEK9-210ENST00000557026 STACQ99469 402 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 IGLV3-10A0A075B6K4 115 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 C13orf42A0A1B0GVH6 325 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 SLC22A23A1A5C7 686 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 HTR3BO95264 441 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 C1SP09871 688 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 SFTPDP35247 375 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 CSNK1EP49674 416 aaKnown RBP11.21□□□□□ -0.61
NEK9-210ENST00000557026 SHHQ15465 462 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 NKPD1Q17RQ9 610 aa11.21□□□□□ -0.61
NEK9-210ENST00000557026 CDNFQ49AH0 187 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms