RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SERPINF2P08697 491 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 ZNF17P17021 662 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 CYP3A5P20815 502 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 GPX3P22352 226 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 WARSP23381 471 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 CTNNA2P26232 953 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MAT2AP31153 395 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 HOXA6P31267 233 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 ASIC1P78348 528 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 RBP5P82980 135 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MAPK11Q15759 364 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 ECSCRQ19T08 205 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 EOGTQ5NDL2 527 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 HES3Q5TGS1 186 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SHEQ5VZ18 495 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MACC1Q6ZN28 852 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 FAM43BQ6ZT52 329 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 PAQR9Q6ZVX9 377 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SPATA19Q7Z5L4 167 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 ACOT1Q86TX2 421 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 C12orf29Q8N999 325 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SLC2A14Q8TDB8 520 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 GANCQ8TET4 914 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 GRK7Q8WTQ7 553 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SCFD1Q8WVM8 642 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SMPDL3AQ92484 453 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 KLK6Q92876 244 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 EEF2KMTQ96G04 330 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MSANTD3Q96H12 275 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 TSSK2Q96PF2 358 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 RCHY1Q96PM5 261 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SIGLEC12Q96PQ1 595 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MCCC1Q96RQ3 725 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 PRMT1Q99873 361 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 INPP5KQ9BT40 448 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 SYNDIG1Q9H7V2 258 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 TMEM206Q9H813 350 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 DEC1Q9P2X7 70 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 HBS1LQ9Y450 684 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 PDCD11Q14690 1871 aaKnown RBP2.34□□□□□ -2.03
SCFD1-219ENST00000556413 DNHD1Q96M86 4753 aa2.34□□□□□ -2.03
SCFD1-219ENST00000556413 MTCL1Q9Y4B5 1905 aaKnown RBP2.34□□□□□ -2.04
SCFD1-219ENST00000556413 EML5Q05BV3 1969 aa2.34□□□□□ -2.04
SCFD1-219ENST00000556413 NBPF19A0A087WUL8 3843 aa2.34□□□□□ -2.04
SCFD1-219ENST00000556413 PKD1L2Q7Z442 2459 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 DSPP15924 2871 aaKnown RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 GREB1Q4ZG55 1949 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 PCDH15Q96QU1 1955 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 A0A0B4J203 849 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 LRRIQ3A6PVS8 624 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 H7C0S8 307 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 FBP2O00757 339 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SCO2O43819 266 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 RHBDL1O75783 438 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 OLFM2O95897 454 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 TNNC2P02585 160 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CISD3P0C7P0 127 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 TNNI1P19237 187 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CD70P32970 193 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 OR3A3P47888 321 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 PSMD8P48556 350 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 TPMTP51580 245 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ZNF131P52739 623 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 NDST1P52848 882 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CAPZA1P52907 286 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ADARP55265 1226 aaKnown RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 TNNC1P63316 161 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SLC7A9P82251 487 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 GTF2BQ00403 316 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CKAP4Q07065 602 aaKnown RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CYP24A1Q07973 514 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CNTN1Q12860 1018 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 CDO1Q16878 200 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 GOLGA7BQ2TAP0 167 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ZNF699Q32M78 642 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 C10orf120Q5SQS8 335 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 HECTD3Q5T447 861 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 TMEM215Q68D42 235 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 NEPROQ6NW34 567 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SLC27A4Q6P1M0 643 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ZNF720Q7Z2F6 126 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SPATA21Q7Z572 469 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SCD5Q86SK9 330 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 MEX3DQ86XN8 651 aaKnown RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 EID2Q8N6I1 236 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ZNRF1Q8ND25 227 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SLC35C1Q96A29 364 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 DNAJC19Q96DA6 116 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ERP27Q96DN0 273 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 SGF29Q96ES7 293 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 BSCL2Q96G97 398 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ANKRD36BP1Q96IX9 119 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ACCSQ96QU6 501 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 BAG1Q99933 345 aaPredicted RBP2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ACBD6Q9BR61 282 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 RAB34Q9BZG1 259 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 ELOVL4Q9GZR5 314 aa2.33□□□□□ -2.04
SCFD1-219ENST00000556413 LHX5Q9H2C1 402 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms