RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 HSPB2Q16082 182 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 KLHL26Q53HC5 615 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 SEM1Q6ZVN7 128 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 LACC1Q8IV20 430 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 LIX1LQ8IVB5 337 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 C9orf106Q8NAJ2 232 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 CHDHQ8NE62 594 aaPredicted RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 LILRB4Q8NHJ6 448 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 ZFP90Q8TF47 636 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 INTS12Q96CB8 462 aaKnown RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 RNF145Q96MT1 663 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 NPAS1Q99742 590 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 KLHDC3Q9BQ90 382 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 THUMPD3Q9BV44 507 aaKnown RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 TMEM120AQ9BXJ8 343 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 PINK1Q9BXM7 581 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 QRSL1Q9H0R6 528 aaKnown RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 TPT1P8Q9HAU6 139 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 CHST11Q9NPF2 352 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 MED4Q9NPJ6 270 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 STOML1Q9UBI4 398 aa9.99□□□□□ -0.81
DDB1-222ENST00000543627 KLF2Q9Y5W3 355 aaPredicted RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 USP9YO00507 2555 aaPredicted RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 SPTBN1Q01082 2364 aaKnown RBP9.99□□□□□ -0.81
DDB1-222ENST00000543627 CENPVL1A0A0U1RR11 272 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 A0A1W2PQD3 144 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 TMEM247A6NEH6 219 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 EEF1E1-BLOC1S5C9J1V9 151 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CLIC1O00299 241 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 EEF1E1O43324 174 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 UGT2B17O75795 530 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 TOXO94900 526 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 TMIGD3P0DMS9 266 aaPredicted RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 CD1EP15812 388 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ME2P23368 584 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 UQCRC1P31930 480 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 SFTPDP35247 375 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CLDN15P56746 228 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CLDN18P56856 261 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CLDN20P56880 219 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 EEFSECP57772 596 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 DSTNP60981 165 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 RPS3AP61247 264 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 TOMM34Q15785 309 aaPredicted RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 MAPK14Q16539 360 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 RIPPLY2Q5TAB7 128 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 NSUN5P2Q63ZY6 315 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 TYW3Q6IPR3 259 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 HEPHL1Q6MZM0 1159 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 MEX3BQ6ZN04 569 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 MTERF4Q7Z6M4 381 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 FUNDC1Q8IVP5 155 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 GCNT2Q8N0V5 402 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ZNF619Q8N2I2 560 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 NAXEQ8NCW5 288 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 TOR1AIP2Q8NFQ8 470 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 FBXO27Q8NI29 283 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ZNF563Q8TA94 476 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ZPLD1Q8TCW7 415 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 MIPOL1Q8TD10 442 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 GTF2H4Q92759 462 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ZG16BQ96DA0 208 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 RABEP2Q9H5N1 569 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CALHM2Q9HA72 323 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 CACYBPQ9HB71 228 aaKnown RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 HHATLQ9HCP6 504 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 SLAMF8Q9P0V8 285 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.98□□□□□ -0.81
DDB1-222ENST00000543627 PCDHB14Q9Y5E9 798 aa9.98□□□□□ -0.81
DDB1-222ENST00000543627 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 SPTAN1Q13813 2472 aaKnown RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 A0A087WZY1 265 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 IGLV3-32A0A0A0MS00 114 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 PRAMEF27A3QJZ7 478 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 CLDN24A6NM45 220 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 C5orf58C9J3I9 102 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 DVL2O14641 736 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 TNFSF11O14788 317 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 BCHEP06276 602 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 CHRM4P08173 479 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 IL7RP16871 459 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 ZNF708P17019 499 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 CCNA2P20248 432 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 CAPN3P20807 821 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 SIRPAP78324 504 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 FUT5Q11128 374 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 FOXF1Q12946 379 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 CBFBQ13951 182 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 QPRTQ15274 297 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 GLYR1Q49A26 553 aaPredicted RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 PAGE3Q5JUK9 113 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 BLOC1S3Q6QNY0 202 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 FRRS1Q6ZNA5 592 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 MSANTD1Q6ZTZ1 278 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 EIF3MQ7L2H7 374 aaKnown RBP9.97□□□□□ -0.81
DDB1-222ENST00000543627 CNEP1R1Q8N9A8 125 aa9.97□□□□□ -0.81
DDB1-222ENST00000543627 ZBTB8AQ96BR9 441 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms