RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DPH1Q9BZG8 443 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TCEAL2Q9H3H9 227 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 KCNK13Q9HB14 408 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 OR6C2Q9NZP2 312 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ATG4BQ9Y4P1 393 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 A6NIZ1 184 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 IMPA2O14732 288 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 FADS1O60427 444 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 MPIG6BO95866 241 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CAPNS1P04632 268 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ERVPABLB-1P60509 514 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RAP1BP61224 184 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RAP1AP62834 184 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TP53I3Q53FA7 332 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 COMMD6Q7Z4G1 85 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 OR9Q2Q8NGE9 314 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TSACCQ96A04 125 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 INPP5KQ9BT40 448 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 HEBP1Q9NRV9 189 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TXNL4BQ9NX01 149 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 COPS3Q9UNS2 423 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PCDHA9Q9Y5H5 950 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 LOC285095A0A1B0GVY8 99 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF736B4DX44 427 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SCAF4O95104 1147 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GAAP10253 952 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SSTR4P31391 388 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 RAB7AP51149 207 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 DAP3P51398 398 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SELENOWP63302 87 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 NSDHLQ15738 373 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 C18orf21Q32NC0 220 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 BCL7AQ4VC05 210 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 OR51D1Q8NGF3 324 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GPR148Q8TDV2 347 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 APIPQ96GX9 242 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 FTSJ1Q9UET6 329 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 AK6Q9Y3D8 172 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GPR37L1O60883 481 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SERPINE2P07093 398 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 RPS15P62841 145 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GRM7Q14831 915 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 TMEM151BQ8IW70 566 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SUMF2Q8NBJ7 301 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 OR9A4Q8NGU2 314 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 OR14L1PQ8NHC6 308 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 FUBP1Q96AE4 644 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SERINC2Q96SA4 455 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 TXN2Q99757 166 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GPR174Q9BXC1 333 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PINK1Q9BXM7 581 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF160Q9HCG1 818 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 MRPS10P82664 201 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SRYQ05066 204 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 AGAP7PQ5VUJ5 663 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PLXDC1Q8IUK5 500 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 NAGSQ8N159 534 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PRR18Q8N4B5 295 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 FNDC9Q8TBE3 224 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SYNPRQ8TBG9 265 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 TXNDC15Q96J42 360 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GCM1Q9NP62 436 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SERTAD4Q9NUC0 356 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SLC6A5Q9Y345 797 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 LCATP04180 440 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 LPLP06858 475 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PCGF2P35227 344 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ETV4P43268 484 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SPINT3P49223 89 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 GPR50Q13585 617 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 COL13A1Q5TAT6 717 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SLC39A13Q96H72 371 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF587Q96SQ5 575 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 HERPUD2Q9BSE4 406 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 THSD1Q9NS62 852 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 HAO2Q9NYQ3 351 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 LOC105369274A0A096LPK9 316 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 C2orf78A6NCI8 922 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 CD300LBA8K4G0 201 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 BPIP17213 487 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 SLC6A8P48029 635 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 CX3CR1P49238 355 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PGGT1BP53609 377 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 RPL23AP62750 156 aaKnown RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ZXDBP98169 803 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 MEF2DQ14814 521 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 TCTE1Q5JU00 501 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 CPOQ8IVL8 374 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 OR4N4Q8N0Y3 316 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 PARP16Q8N5Y8 322 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 THAP7Q9BT49 309 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-208ENST00000538570 NPAP1Q9NZP6 1156 aa9.38□□□□□ -0.91
COL4A6-208ENST00000538570 ARPC1BO15143 372 aaKnown RBP9.37□□□□□ -0.91
COL4A6-208ENST00000538570 S100A8P05109 93 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms