RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 YLPM1P49750 1951 aaKnown RBP3.38□□□□□ -1.87
YBX3-205ENST00000536107 FREM3P0C091 2139 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 DOCK7Q96N67 2140 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 IQANK1A0A1B0GTG1 560 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TCRBV5S1A1TA0A578 114 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 URADA6NGE7 173 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 IQCF5A8MTL0 148 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 E9PQ18 207 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 LYNX1G3V0Z9 82 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 OR1F1O43749 312 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 LCMT2O60294 686 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 OR1I1O60431 355 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CDH16O75309 829 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 AQP8O94778 261 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 LYNX1P0DP58 116 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 ENO3P13929 434 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 COX7A2P14406 83 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TCF4P15884 667 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 DDCP20711 480 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 SAT1P21673 171 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 PTAFRP25105 342 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CASP3P42574 277 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CDKN2AP42771 156 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 GPR6P46095 362 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 MTNR1AP48039 350 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 ALDH9A1P49189 494 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TMED10P49755 219 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 TPD52P55327 224 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 HNRNPH2P55795 449 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 CLDN15P56746 228 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 BTN3A2P78410 334 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 MYBPC1Q00872 1141 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 IL1RL1Q01638 556 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 PKP1Q13835 747 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 DPCR1Q3MIW9 517 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TEX44Q53QW1 395 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 COBLL1Q53SF7 1204 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TOR2AQ5JU69 321 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 KLHDC7AQ5VTJ3 777 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 RAET1LQ5VY80 246 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 PTRHD1Q6GMV3 140 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 ADNP2Q6IQ32 1131 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 ACSM5Q6NUN0 579 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 PGBD2Q6P3X8 592 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 FIP1L1Q6UN15 594 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 LCTLQ6UWM7 567 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 STRA8Q7Z7C7 330 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 EXOC3L1Q86VI1 746 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 JAZF1Q86VZ6 243 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 C9orf40Q8IXQ3 194 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 MCOLN2Q8IZK6 566 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 KRT222Q8N1A0 295 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CA13Q8N1Q1 262 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 ZNF786Q8N393 782 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TBC1D19Q8N5T2 526 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CEP112Q8N8E3 955 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 MFSD9Q8NBP5 474 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 Q8NFD4 153 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 TM4SF19Q96DZ7 209 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 SLC47A1Q96FL8 570 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 SENP5Q96HI0 755 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 GMPPAQ96IJ6 420 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 RITA1Q96K30 269 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 DGAT2Q96PD7 388 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 APOL2Q9BQE5 337 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 MAK16Q9BXY0 300 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 ACTRT3Q9BYD9 372 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 OR2B2Q9GZK3 357 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CENPHQ9H3R5 247 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 TSPY26PQ9H489 355 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CLK4Q9HAZ1 481 aaKnown RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 FAM114A2Q9NRY5 505 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.37□□□□□ -1.871e-5■■■■□ 19.8
YBX3-205ENST00000536107 C1RLQ9NZP8 487 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 MCM8Q9UJA3 840 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 FBXO9Q9UK97 447 aaPredicted RBP3.37□□□□□ -1.87
YBX3-205ENST00000536107 RCOR1Q9UKL0 485 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 UTS2RQ9UKP6 389 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 NUP50Q9UKX7 468 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 CFAP45Q9UL16 551 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 GRID1Q9ULK0 1009 aa3.37□□□□□ -1.87
YBX3-205ENST00000536107 LYSTQ99698 3801 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 TRBV5-4A0A0C4DH59 114 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 WI2-2373I1.2A0A1W2PRP0 233 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 F5H697 171 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 H3BML4 177 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 H3BNX3 289 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PIP5K1BO14986 540 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PPIHO43447 177 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 PLPP2O43688 288 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 SS18L1O75177 396 aaPredicted RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 LYZL6O75951 148 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 CLPXO76031 633 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 NDUFA7O95182 113 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 SYNGR4O95473 234 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ETHE1O95571 254 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 TUBBP07437 444 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms