RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZNF682O95780 498 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 NGFRP08138 427 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 CELA3AP09093 270 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 GKN3PP0CG01 181 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 NID1P14543 1247 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF24P17028 368 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 RPS4Y1P22090 263 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 RYKP34925 604 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 PGM1P36871 562 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 MAGEA5P43359 124 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 RASSF2P50749 326 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 KCNJ10P78508 379 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SNTA1Q13424 505 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 LARS2Q15031 903 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 FNDC7Q5VTL7 733 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 PRAMEF8Q5VWM4 474 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 PRAMEF7Q5VXH5 474 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 CBLN3Q6UW01 205 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 EIF3MQ7L2H7 374 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 COMTD1Q86VU5 262 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SLC30A8Q8IWU4 369 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 CLIP4Q8N3C7 705 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 METTL25Q8N6Q8 603 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TNIP2Q8NFZ5 429 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 VANGL1Q8TAA9 524 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 RNF138Q8WVD3 245 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 WBP1Q96G27 269 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TMEM41AQ96HV5 264 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 TPD52L3Q96J77 140 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SPATA5L1Q9BVQ7 753 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 DEFB127Q9H1M4 99 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 ZFP64Q9NPA5 681 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SDHAF3Q9NRP4 125 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SUCOQ9UBS9 1254 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 CD300AQ9UGN4 299 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SLC13A4Q9UKG4 626 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 PRPF19Q9UMS4 504 aaKnown RBP12.06□□□□□ -0.48
HDAC1-208ENST00000482310 NTNG1Q9Y2I2 539 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
HDAC1-208ENST00000482310 A0A1W2PQD3 144 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ANKRD33BA6NCL7 494 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ACOT7O00154 380 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ZNHIT1O43257 154 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF264O43296 627 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 SERPINB7O75635 380 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 SERPINA1P01009 418 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 HSD17B1P14061 328 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ETS2P15036 469 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 GGT1P19440 569 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 TNFRSF1BP20333 461 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 HTR1EP28566 365 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ERFP50548 548 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 MLLT10P55197 1068 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 PCBP3P57721 371 aaKnown RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 HOXC5Q00444 222 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ALDH6A1Q02252 535 aaKnown RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 C17orf67Q0P5P2 114 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 FOXO1Q12778 655 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 TIGD3Q6B0B8 471 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 GLYATQ6IB77 296 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 TMEM81Q6P7N7 255 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 CYP2R1Q6VVX0 501 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 PATL1Q86TB9 770 aaKnown RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 YRDCQ86U90 279 aaKnown RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 PLCZ1Q86YW0 608 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 TMEM251Q8N6I4 163 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 OR2M3Q8NG83 312 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 OR5M1Q8NGP8 315 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 B4GALNT2Q8NHY0 566 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 RELTQ969Z4 430 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 RSPO3Q9BXY4 272 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 CADM1Q9BY67 442 aaKnown RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF703Q9H7S9 590 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 B4GALT7Q9UBV7 327 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 ZNF232Q9UNY5 417 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 RPH3AQ9Y2J0 694 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-208ENST00000482310 C15orf41Q9Y2V0 281 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 IFT52Q9Y366 437 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 PCDHGB6Q9Y5F9 930 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 LIPGQ9Y5X9 500 aa12.05□□□□□ -0.48
HDAC1-208ENST00000482310 NPIPA5E9PKD4 350 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 PYCARD-AS1I3L0S3 204 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 M0R3H8 397 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 AP3D1O14617 1153 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ARPC2O15144 300 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 WISP2O76076 250 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 MFN2O95140 757 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 THBS1P07996 1170 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 GUSBP08236 651 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 ME2P23368 584 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 KDELR2P33947 212 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 CRYBA2P53672 197 aa12.04□□□□□ -0.48
HDAC1-208ENST00000482310 EEF1A1P68104 462 aaKnown RBP12.04□□□□□ -0.48
HDAC1-208ENST00000482310 PLAURQ03405 335 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms