RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507		H0Y3Z8	333 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	SYT5	O00445	386 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	ANGPT2	O15123	496 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	HCRTR2	O43614	444 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	STX11	O75558	287 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	NR2F1	P10589	423 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	TBXA2R	P21731	343 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	ASCL1	P50553	236 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	ATP4B	P51164	291 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	ZNF41	P51814	821 aa	Predicted RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	GAS1	P54826	345 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	DSCR4	P56555	118 aa	Predicted RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	1e-22	■■■■□ 19.3
FDPS-204	ENST00000461507	DCST1	Q5T197	706 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	PDZK1	Q5T2W1	519 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	NSUN5P2	Q63ZY6	315 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	PPP4R4	Q6NUP7	873 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	AAGAB	Q6PD74	315 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	APOOL	Q6UXV4	268 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	MSANTD1	Q6ZTZ1	278 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	HMGN2P46	Q86SG4	172 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	UBQLNL	Q8IYU4	475 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	TNIP2	Q8NFZ5	429 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	OR2M3	Q8NG83	312 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	OR5M1	Q8NGP8	315 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	FAM110B	Q8TC76	370 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	AURKB	Q96GD4	344 aa	Predicted RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	RTN4R	Q9BZR6	473 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	OR2B2	Q9GZK3	357 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	HOXD1	Q9GZZ0	328 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	CACYBP	Q9HB71	228 aa	Known RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	WDR45	Q9Y484	360 aa		11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	PRRC2A	P48634	2157 aa	Known RBP	11.51	□□□□□ -0.57
FDPS-204	ENST00000461507	ALG1L2	C9J202	215 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507		H3BML4	177 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	DYNC1I1	O14576	645 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	DVL2	O14641	736 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	SEC14L5	O43304	696 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	TNFRSF21	O75509	655 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ACTL6A	O96019	429 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	C1QC	P02747	245 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ETFA	P13804	333 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	BMP7	P18075	431 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	LCN1	P31025	176 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ZNF136	P52737	540 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	RIPPLY3	P57055	190 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	MYBPH	Q13203	477 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	RCAN2	Q14206	197 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	CD226	Q15762	336 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	NDUFAF6	Q330K2	333 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ARHGAP11B	Q3KRB8	267 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	COX20	Q5RI15	118 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	EXOSC6	Q5RKV6	272 aa	Known RBP	11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	BLOC1S3	Q6QNY0	202 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ENPP6	Q6UWR7	440 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ARSK	Q6UWY0	536 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ADGRE4P	Q86SQ3	457 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	MISP	Q8IVT2	679 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	B4GALNT2	Q8NHY0	566 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ROPN1L	Q96C74	230 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	WDYHV1	Q96HA8	205 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	TRIB1	Q96RU8	372 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	SDF2	Q99470	211 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	TPT1P8	Q9HAU6	139 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	HHATL	Q9HCP6	504 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	SLC6A13	Q9NSD5	602 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	ITGB1BP2	Q9UKP3	347 aa		11.5	□□□□□ -0.57
FDPS-204	ENST00000461507	SHISA8	B8ZZ34	492 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	HMGN4	O00479	90 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	FCMR	O60667	390 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	CTAG2	O75638	210 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	H6PD	O95479	791 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	IL18BP	O95998	194 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	BCHE	P06276	602 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	UBL4A	P11441	157 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	CPN1	P15169	458 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	STAR	P49675	285 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	ATP12A	P54707	1039 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	DSTN	P60981	165 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	IRX1	P78414	480 aa	Predicted RBP	11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	GANAB	Q14697	944 aa	Known RBP	11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	SYPL1	Q16563	259 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	CHMP1B	Q7LBR1	199 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	MED12L	Q86YW9	2145 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	FUNDC1	Q8IVP5	155 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	ANKFN1	Q8N957	763 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	FADS6	Q8N9I5	356 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	CHDH	Q8NE62	594 aa	Predicted RBP	11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	ZPLD1	Q8TCW7	415 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	MIPOL1	Q8TD10	442 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	ZFP90	Q8TF47	636 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	GTF2H4	Q92759	462 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	NINJ1	Q92982	152 aa		11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	RNASE6	Q93091	150 aa	Known RBP	11.49	□□□□□ -0.57
FDPS-204	ENST00000461507	C1GALT1C1	Q96EU7	318 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms