RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 ZNF696Q9H7X3 374 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
NELFE-204ENST00000436289 TCRBV9S1A1TA0A576 114 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 VENTXO95231 258 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 PSMG1O95456 288 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 PDYNP01213 254 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 IL3P08700 152 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 HPGDP15428 266 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SSTR1P30872 391 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SFTPDP35247 375 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 RFX3P48380 749 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 CHN2P52757 468 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 PDCD2Q16342 344 aaPredicted RBP13.19□□□□□ -0.3
NELFE-204ENST00000436289 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 VPS26BQ4G0F5 336 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 OR7E24Q6IFN5 339 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 CTAGE3PQ8IX95 158 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 OR2L13Q8N349 312 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 ZNF433Q8N7K0 673 aaPredicted RBP13.19□□□□□ -0.3
NELFE-204ENST00000436289 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SEMA6DQ8NFY4 1073 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.3
NELFE-204ENST00000436289 SLC9A6Q92581 669 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 DDX18Q9NVP1 670 aaKnown RBP13.19□□□□□ -0.3
NELFE-204ENST00000436289 NTMQ9P121 344 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 SLC25A15Q9Y619 301 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 ATP23Q9Y6H3 246 aa13.19□□□□□ -0.3
NELFE-204ENST00000436289 GNG14A0A1W2PPG7 69 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 CIB4A0PJX0 185 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 MYO1GB0I1T2 1018 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 TRIM77I1YAP6 450 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 UPK1AO00322 258 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 STX16O14662 325 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 EIF3HO15372 352 aaKnown RBP eCLIP13.18□□□□□ -0.3
NELFE-204ENST00000436289 LY6HO94772 140 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 KLHL2O95198 593 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 OTCP00480 354 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 GABRA3P34903 492 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 LIMS1P48059 325 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 ZNF83P51522 516 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 SNRPD2P62316 118 aaKnown RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 PHC1P78364 1004 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 DR1Q01658 176 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 TRAF3Q13114 568 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 FBXW9Q5XUX1 488 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 CENPLQ8N0S6 344 aaPredicted RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 POC1BQ8TC44 478 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 ARL8AQ96BM9 186 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 PSD2Q9BQI7 771 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 SRXN1Q9BYN0 137 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
NELFE-204ENST00000436289 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
NELFE-204ENST00000436289 ZNF195O14628 629 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 TP73O15350 636 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 HSPA4LO95757 839 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 C2P06681 752 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 LINGO3P0C6S8 592 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 NCBP2P52298 156 aaKnown RBP eCLIP13.17□□□□□ -0.3
NELFE-204ENST00000436289 DVL1P1P54792 670 aaPredicted RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 NAB1Q13506 487 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 CARTPTQ16568 116 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 TMEM176BQ3YBM2 270 aaPredicted RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 USP43Q70EL4 1123 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 OR4F6Q8NGB9 312 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 OR4C3Q8NH37 302 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 OR52N5Q8NH56 324 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 B4GALNT2Q8NHY0 566 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 MUS81Q96NY9 551 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 NPAS1Q99742 590 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 BPESC1Q9GZL8 116 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 UBQLN4Q9NRR5 601 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 FARSBQ9NSD9 589 aaKnown RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
NELFE-204ENST00000436289 GPC6Q9Y625 555 aaPredicted RBP13.17□□□□□ -0.3
NELFE-204ENST00000436289 A0A1W2PQD3 144 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 CCT8L1PA6NM43 557 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 M0R1B8 84 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 PCDH7O60245 1069 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 CYTIPO60759 359 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 OXSR1O95747 527 aaPredicted RBP13.16□□□□□ -0.3
NELFE-204ENST00000436289 KRT6AP02538 564 aa13.16□□□□□ -0.3
NELFE-204ENST00000436289 KRT6BP04259 564 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms