RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GRID1Q9ULK0 1009 aa14.06□□□□□ -0.16
DDX55-202ENST00000354291 G3V2L1 256 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 NDUFB5O43674 189 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 SRP14P37108 136 aaKnown RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 CR1LQ2VPA4 569 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 CFAP157Q5JU67 520 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 TMEM201Q5SNT2 666 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 SH2D4BQ5SQS7 431 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 ZYG11AQ6WRX3 759 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 BHLHA15Q7RTS1 189 aaPredicted RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 NUFIP2Q7Z417 695 aaKnown RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 GALNT10Q86SR1 603 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 MARCH3Q86UD3 253 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 WDR75Q8IWA0 830 aaKnown RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 FBXL14Q8N1E6 418 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 DEPDC4Q8N2C3 294 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 C3orf56Q8N813 242 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 BANPQ8N9N5 519 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 OR2W6PQ8NHA6 318 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 KAT2AQ92830 837 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 EXOSC8Q96B26 276 aaKnown RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 ZMYND19Q96E35 227 aaPredicted RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 PAQR5Q9NXK6 330 aaPredicted RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 TAS2R9Q9NYW1 312 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 FLRT3Q9NZU0 649 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 EMCNQ9ULC0 261 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 WBP11Q9Y2W2 641 aaKnown RBP14.05□□□□□ -0.16
DDX55-202ENST00000354291 PLCE1Q9P212 2302 aa14.05□□□□□ -0.16
DDX55-202ENST00000354291 E7EQL1 145 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 TNFSF11O14788 317 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 FADS1O60427 444 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 PLOD3O60568 738 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 CRCPO75575 148 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 LY6HO94772 140 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 PROCP04070 461 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 APEHP13798 732 aaKnown RBP14.04□□□□□ -0.16
DDX55-202ENST00000354291 DDCP20711 480 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 CRHR1P34998 444 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 DNAJB13P59910 316 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 ZNF763Q0D2J5 394 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 IMPG1Q17R60 797 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 C11orf71Q6IPW1 123 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 SEZ6L2Q6UXD5 910 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 TFAP2EQ6VUC0 442 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 FAM9CQ8IZT9 166 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 MUC15Q8N387 334 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 OR9A2Q8NGT5 310 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 FAM76AQ8TAV0 307 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 UBLCP1Q8WVY7 318 aaPredicted RBP14.04□□□□□ -0.16
DDX55-202ENST00000354291 BBS4Q96RK4 519 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 PRR14Q9BWN1 585 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 POTEKPQ9BYX7 375 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 SENP1Q9P0U3 644 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 VDAC3Q9Y277 283 aa14.04□□□□□ -0.16
DDX55-202ENST00000354291 SLITRK5O94991 958 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 CSF3P09919 207 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 CLK3P49761 638 aaKnown RBP14.03□□□□□ -0.16
DDX55-202ENST00000354291 FABP6P51161 128 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 FOXA1P55317 472 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 C2orf80Q0P641 193 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 ITGADQ13349 1161 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 P2RY6Q15077 328 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 PPA1Q15181 289 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 HBMQ6B0K9 141 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 FRMD7Q6ZUT3 714 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 TRIM46Q7Z4K8 759 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 TUSC5Q8IXB3 177 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 GSPT2Q8IYD1 628 aaKnown RBP14.03□□□□□ -0.16
DDX55-202ENST00000354291 OR2V1Q8NHB1 315 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDX55-202ENST00000354291 OSTF1Q92882 214 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 MUCL1Q96DR8 90 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 ADGRG7Q96K78 797 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 VSTM2LQ96N03 204 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 DHRS9Q9BPW9 319 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 USB1Q9BQ65 265 aaKnown RBP14.03□□□□□ -0.16
DDX55-202ENST00000354291 EBPLQ9BY08 206 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 TMEM185BQ9H7F4 350 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 MIEF1Q9NQG6 463 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
DDX55-202ENST00000354291 TAS2R7Q9NYW3 318 aa14.03□□□□□ -0.16
DDX55-202ENST00000354291 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 PLIN3O60664 434 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 LYZL6O75951 148 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 SHBGP04278 402 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 CPA3P15088 417 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 EFNA4P52798 201 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 TMEM44Q2T9K0 475 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
DDX55-202ENST00000354291 SLC22A25Q6T423 547 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 CCDC63Q8NA47 563 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 REXO5Q96IC2 774 aaKnown RBP14.02□□□□□ -0.17
DDX55-202ENST00000354291 METTL2AQ96IZ6 378 aaKnown RBP14.02□□□□□ -0.17
DDX55-202ENST00000354291 OXSMQ9NWU1 459 aa14.02□□□□□ -0.17
DDX55-202ENST00000354291 A0A087WV62 115 aa14.01□□□□□ -0.17
DDX55-202ENST00000354291 A0A0J9YW62 118 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms