RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 SEC22BO75396 215 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 PLGP00747 810 aaPredicted RBP14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 FAM153BP0C7A2 387 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 UROSP10746 265 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 ZNF844Q08AG5 666 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 DUSP5Q16690 384 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 FAM153CQ494X1 144 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 ADAM5Q6NVV9 412 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 CNPY4Q8N129 248 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 GATSQ8NAP1 163 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 NUP43Q8NFH3 380 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 OR6Y1Q8NGX8 325 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 LILRB1Q8NHL6 650 aaPredicted RBP14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 TMEM171Q8WVE6 324 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 OSTF1Q92882 214 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 CCT7Q99832 543 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 REEP4Q9H6H4 257 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 ACSS1Q9NUB1 689 aaPredicted RBP14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 C1orf109Q9NX04 203 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 PTGDR2Q9Y5Y4 395 aa14.19□□□□□ -0.14
GTF2F1-203ENST00000594213 A0A1W2PQD3 144 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 OVOL3O00110 214 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 GCM2O75603 506 aaPredicted RBP14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 SYNGR4O95473 234 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 LINGO3P0C6S8 592 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 SDC1P18827 310 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 SHC1P29353 583 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 AGTR1P30556 359 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 PRKAG1P54619 331 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 CD226Q15762 336 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 HBMQ6B0K9 141 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 CLEC6AQ6EIG7 209 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 ZCCHC12Q6PEW1 402 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 FIGNL1Q6PIW4 674 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 RNF165Q6ZSG1 346 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 TRABD2AQ86V40 505 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 WFDC8Q8IUA0 241 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 OR2T11Q8NH01 316 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 ZBED6CLQ96FA7 236 aaPredicted RBP14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 C16orf58Q96GQ5 468 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 TUBB1Q9H4B7 451 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 CXorf56Q9H5V9 222 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 UBQLN4Q9NRR5 601 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 OXSMQ9NWU1 459 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 TBK1Q9UHD2 729 aa14.18□□□□□ -0.14
GTF2F1-203ENST00000594213 SLC28A1O00337 649 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 AKAP10O43572 662 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 GLRA3O75311 464 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 TUBBP07437 444 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 THBS1P07996 1170 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 GPC1P35052 558 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 PRIM2P49643 509 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 MANFP55145 182 aaKnown RBP14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 ATP5J2P56134 94 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 CARD18P57730 90 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 TNK1Q13470 666 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 RFTN2Q52LD8 501 aaPredicted RBP14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 PPP4R4Q6NUP7 873 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 MISPQ8IVT2 679 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 GABRG1Q8N1C3 465 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 FBXO30Q8TB52 745 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 RAB3IL1Q8TBN0 382 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 RNF128Q8TEB7 428 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 ROBO4Q8WZ75 1007 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 AKAP1Q92667 903 aaKnown RBP eCLIP14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 PPCDCQ96CD2 204 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 KLHL15Q96M94 604 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 MS4A4EQ96PG1 132 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 C12orf65Q9H3J6 166 aaKnown RBP14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 TMEM185BQ9H7F4 350 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 FANCFQ9NPI8 374 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 SIRT3Q9NTG7 399 aaPredicted RBP14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
GTF2F1-203ENST00000594213 HEATR5AQ86XA9 2040 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 CRCPO75575 148 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 DANCRP0C864 163 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 CRHR1P34998 444 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 ZNF41P51814 821 aaPredicted RBP14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 PPP2R2BQ00005 443 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 ZNF239Q16600 458 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 CCDC153Q494R4 210 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 CFAP157Q5JU67 520 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 PDSS1Q5T2R2 415 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 GTF2IRD2BQ6EKJ0 949 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 SEZ6L2Q6UXD5 910 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 TFAP2EQ6VUC0 442 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 NUFIP2Q7Z417 695 aaKnown RBP14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 GTF2IRD2Q86UP8 949 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 LILRA2Q8N149 483 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 STEAP2Q8NFT2 490 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 B4GALNT2Q8NHY0 566 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 ZFP28Q8NHY6 868 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 S100PBPQ96BU1 408 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 ZNF524Q96C55 264 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 SH3YL1Q96HL8 342 aaPredicted RBP14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 TSSK3Q96PN8 268 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 HDHD5Q9BXW7 423 aa14.16□□□□□ -0.14
GTF2F1-203ENST00000594213 SRXN1Q9BYN0 137 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms