RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HPGDP15428 266 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 ATP6V1C1P21283 382 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 UQCRC2P22695 453 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 S100A3P33764 101 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 DGKQP52824 942 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 SUCLG1P53597 346 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 TPD52P55327 224 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 HDXQ7Z353 690 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 MISPQ8IVT2 679 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 CHDHQ8NE62 594 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 GOT1L1Q8NHS2 421 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 ACTRT2Q8TDY3 377 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 C14orf79Q96F83 325 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 CCDC115Q96NT0 180 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 PIGQQ9BRB3 760 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 HHATLQ9HCP6 504 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 DUXAA6NLW8 204 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 DVL2O14641 736 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 RCBTB2O95199 551 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 TGM6O95932 706 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 POU3F2P20265 443 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 CTSSP25774 331 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 AGFG1P52594 562 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 ATP12AP54707 1039 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 CASP9P55211 416 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 CLDN20P56880 219 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 FOXF2Q12947 444 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 SAXO2Q658L1 398 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 NXNQ6DKJ4 435 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 UBQLNLQ8IYU4 475 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 SH3YL1Q96HL8 342 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 SLC35G5Q96KT7 338 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 OR52B2Q96RD2 323 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 HOXD1Q9GZZ0 328 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 VIPAS39Q9H9C1 493 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 BTNL2Q9UIR0 455 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 VDAC3Q9Y277 283 aa16.68■□□□□ 0.26
SHKBP1-202ENST00000593764 A0A087WZY1 265 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 H3BML4 177 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 OIP5O43482 229 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 FCMRO60667 390 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 IL18BPO95998 194 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 PGRP06401 933 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 TMIGD3P0DMS9 266 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 IDO1P14902 403 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 PSMA4P25789 261 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 SSTR2P30874 369 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 PLPPR5Q32ZL2 321 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 ARHGAP11BQ3KRB8 267 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 FBXL19-AS1Q494R0 122 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 FLYWCH1Q4VC44 716 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 PDCD4Q53EL6 469 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 HEPHL1Q6MZM0 1159 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 MTERF4Q7Z6M4 381 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 NEURL3Q96EH8 262 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 MARK4Q96L34 752 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 C7orf26Q96N11 449 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 TM9SF2Q99805 663 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 INPP5KQ9BT40 448 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 OR51I1Q9H343 314 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 SLCO1B3Q9NPD5 702 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 MED17Q9NVC6 651 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 JKAMPQ9P055 326 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 KCNE5Q9UJ90 142 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 AP4B1Q9Y6B7 739 aa16.67■□□□□ 0.26
SHKBP1-202ENST00000593764 C7orf72A4D263 438 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 OR12D1P0DN82 309 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 OPRM1P35372 400 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 CDKN2CP42773 168 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 ASCL1P50553 236 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 RNF144AP50876 292 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 ZNF117Q03924 483 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 AP1ARQ63HQ0 302 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 CBLN3Q6UW01 205 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 EPGNQ6UW88 154 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 OLIG3Q7RTU3 272 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 GTPBP8Q8N3Z3 284 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 MEIOBQ8N635 442 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 ZNF527Q8NB42 609 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 GLB1L3Q8NCI6 653 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 B4GALNT2Q8NHY0 566 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 POC1BQ8TC44 478 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 PHOSPHO1Q8TCT1 267 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 INTS12Q96CB8 462 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 ZFP3Q96NJ6 502 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 OR52E6Q96RD3 313 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 NMUR2Q9GZQ4 415 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 SDR39U1Q9NRG7 319 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 L3MBTL1Q9Y468 752 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 DTNAQ9Y4J8 743 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 POLQO75417 2590 aa16.66■□□□□ 0.26
SHKBP1-202ENST00000593764 CCDC154A6NI56 674 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 TNFRSF21O75509 655 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 STX11O75558 287 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 SLC22A3O75751 556 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 AK1P00568 194 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
SHKBP1-202ENST00000593764 ZNF17P17021 662 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms