RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 AGAP5A6NIR3 686 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 NPIPA2E9PIF3 369 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 NPIPA3F8WFD2 350 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 H3BNH8 94 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 FXYD1O00168 92 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 MRASO14807 208 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 OIP5O43482 229 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 GMFGO60234 142 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 BCHEP06276 602 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 DPP4P27487 766 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 MSX1P28360 303 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 ADH7P40394 386 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 MTPNP58546 118 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 HPCAP84074 193 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 KCNC4Q03721 635 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SRSF1Q07955 248 aaKnown RBP eCLIP10.85□□□□□ -0.674e-7■□□□□ 9.3
RABGGTA-218ENST00000560777 ADRM1Q16186 407 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 TRMT5Q32P41 509 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 EMC4Q5J8M3 183 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 NANOGP8Q6NSW7 305 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 CBLN3Q6UW01 205 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 HMGN2P46Q86SG4 172 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF614Q8N883 585 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 FAM57AQ8TBR7 257 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 OIT3Q8WWZ8 545 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 PMM1Q92871 262 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 C1GALT1C1Q96EU7 318 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 TMEM19Q96HH6 336 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SH3YL1Q96HL8 342 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC39A3Q9BRY0 314 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 EXO5Q9H790 373 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 PTGES2Q9H7Z7 377 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 NANOGQ9H9S0 305 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 HHATLQ9HCP6 504 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 TAS2R10Q9NYW0 307 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SPRR3Q9UBC9 169 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 CORO2BQ9UQ03 480 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 CARD8Q9Y2G2 431 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC6A5Q9Y345 797 aa10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 A0A0G2JPF8 293 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 OR14I1A6ND48 311 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 CLDN24A6NM45 220 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 HNRNPCL2B2RXH8 293 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 HNRNPCL3B7ZW38 293 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 GTPBP1O00178 669 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 HCRTR2O43614 444 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 HNRNPCL1O60812 293 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 HNRNPCL4P0DMR1 293 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ABOP16442 354 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 BMP7P18075 431 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 RPS4Y1P22090 263 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 CRISP3P54108 245 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 GFRA1P56159 465 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 B3GALT5-AS1P59052 145 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 KCNJ10P78508 379 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF117Q03924 483 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 FGFBP1Q14512 234 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 C3AR1Q16581 482 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF630Q2M218 657 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 NDUFAF6Q330K2 333 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 GXYLT1Q4G148 440 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 NHSL2Q5HYW2 709 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 RPS26P11Q5JNZ5 115 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 GCNT6Q5T4J0 391 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 VASNQ6EMK4 673 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ARSKQ6UWY0 536 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 DOLPP1Q86YN1 238 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 PCYOX1LQ8NBM8 494 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 OR14L1PQ8NHC6 308 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 RELTQ969Z4 430 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 RCN3Q96D15 328 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 TIMP4Q99727 224 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 TMEM38AQ9H6F2 299 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 KAT8Q9H7Z6 458 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 BCL2L10Q9HD36 194 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 CALML5Q9NZT1 146 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 SUCOQ9UBS9 1254 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 DKKL1Q9UK85 242 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ACAD8Q9UKU7 415 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 ICAM5Q9UMF0 924 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 RPH3AQ9Y2J0 694 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 L3MBTL1Q9Y468 752 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 MYO18BQ8IUG5 2567 aa10.84□□□□□ -0.67
RABGGTA-218ENST00000560777 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 GCN1Q92616 2671 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 MED12Q93074 2177 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 C15orf38-AP3S2A0A0A6YYH1 394 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 TRGV8A0A0C4DH27 118 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 TMEM247A6NEH6 219 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 PRRG2O14669 202 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 AIM2O14862 343 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 BCKDKO14874 412 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 ZNF264O43296 627 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 LRRTM2O43300 516 aa10.83□□□□□ -0.68
RABGGTA-218ENST00000560777 EIF4E2O60573 245 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms